Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04435 ATGTGGCCAATGAGTTCCTCACAAAGaAAGGGTAAATTTCATGAGCCTTTTGAAATGGATGCACATTTAGGAGCAAAAGAGCTTGACTTGCAGTCTATGAAGgAACAACACCAAAGAGGAGCATCTAATGGAATTTCTATGACAGCTATGACGAATATCATACTCTGCTTTTTGGAgTTTCTTTCAACACTACTACTAATTTATTTGAAATATAATCTTGggcttcttgttcttgtccgcAGTAGTATCAAGTGTTATATGCAACAACTTCTTCATGATCTTGAGCATTGTCACAGTCGCGCCATCTCAAGGGCAGCCTTTAACAAGGCGTGTAGTTACCTTGTGGTATCGGCCCCACCTGAACTTTTGCTTGGAGCTACAAATTATGGAGTTGTTGTGGATTTGTGGAGTGTTGCTTGTATTCTTGCAGAACTACTTGTCGGGAAGCCTATAATGCCTGGACGAACTGAGGAAGTTGAATTTGCCTCGAGACAGGAAATCGTAAAGTGA 510 0.3863 MWPMSSSQRKGKFHEPFEMDAHLGAKELDLQSMKEQHQRGASNGISMTAMTNIILCFLEFLSTLLLIYLKYNLGLLVLVRSSIKCYMQQLLHDLEHCHSRAISRAAFNKACSYLVVSAPPELLLGATNYGVVVDLWSVACILAELLVGKPIMPGRTEEVEFASRQEIVK 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04435 169 SUPERFAMILY Protein kinase-like (PK-like) 51 158 IPR011009 -
Tsu08g04435 169 Gene3D Phosphorylase Kinase; domain 1 52 64 - -
Tsu08g04435 169 PANTHER CELL DIVISION PROTEIN KINASE 80 102 - -
Tsu08g04435 169 PANTHER KINASE CDK9, PUTATIVE-RELATED 119 157 - -
Tsu08g04435 169 PANTHER CELL DIVISION PROTEIN KINASE 119 157 - -
Tsu08g04435 169 PANTHER KINASE CDK9, PUTATIVE-RELATED 80 102 - -
Tsu08g04435 169 Gene3D Transferase(Phosphotransferase) domain 1 65 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04435 Tsu-Chr8 62184496 62187575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04435 76 161 Core Cell Cycle Gene Families AT5G64960 41.026 5.09e-18 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tsu08g04435 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04435 - K08819 atr:18427692 96.2857