Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04381 ATGCTGTTATTACTCCGATTCACTTTGTTCAGTTGCGGTTCCACCGCAATTACTATATCCCTCACACACAAGATCGTTGACTTTAACACACtcatcatttttcttaatacttGGACTGCGATCACCACCGGAAATGAAATTGCACTCCCTGATTTAACCGTCGCCGCCGCTCTTTTTCCTCCGAGAGAAATTCCCGGTATGTCTGGTTCTGTTAAAACTTCCGATGCAAAATTCACTTCTAGAAGATTCATTTTCGAAGCATcgaaaattgaagaattgaagacaaaaataaaaaacaaaatcgaATCAGAATCCGAATTTCATCCTTCTAGAGTAGAGGTTGTTGTAGCTCTGATTTGGAAATGTGCTCTTAAAGCATCAATAGAAATTTCTGGTTCCAAAACGACGTCGTTTAAGCGTTCGATTTTGTTTCAAGCAGTGAATCTCCGTACACGGATGGAACCCGCTGTACCAGAAACTGCAGTTGGGAATTTGGTGTGGCCGTTTTCGGTGACGGTTGAAGAAGAAAGCCACGTGGCGTTACATGAGATGGTGAAAAGAATGAGGAAAGGTATAATGGACTTTATAGAGAATAAAGCAGAGAGGTTTAAAGAGGAAGGTGGGTTTAAGGTTGTTATGGAGAATTTGAAAGAGAGAGTTGAGATTTTGAAAGGAAATGAGAATGagggtagtttggtaatttACAAATGTTCAAGTTGGTGTAAATTTCCATTgcttgaatttgattttggatgGGGAAAACCTCTGTGGAGTTGTAGTGTGAATAAATTGGTGAGTAATGTAATTGCTTTGATGGATACAAAAGATGGTAATGGAGTTGAAGCTTTTGTTACTCTTGATGAAGATGAGATgaaattgtttgaaaaaaatgaggAGCTGCTACACTATGCTTTGCTTAATCCAGCAATTCTTATTTGA 939 0.3493 MLLLLRFTLFSCGSTAITISLTHKIVDFNTLIIFLNTWTAITTGNEIALPDLTVAAALFPPREIPGMSGSVKTSDAKFTSRRFIFEASKIEELKTKIKNKIESESEFHPSRVEVVVALIWKCALKASIEISGSKTTSFKRSILFQAVNLRTRMEPAVPETAVGNLVWPFSVTVEEESHVALHEMVKRMRKGIMDFIENKAERFKEEGGFKVVMENLKERVEILKGNENEGSLVIYKCSSWCKFPLLEFDFGWGKPLWSCSVNKLVSNVIALMDTKDGNGVEAFVTLDEDEMKLFEKNEELLHYALLNPAILI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04381 312 Pfam Transferase family 2 300 - -
Tsu08g04381 312 Gene3D - 75 303 IPR023213 -
Tsu08g04381 312 PANTHER F21J9.9 1 311 - -
Tsu08g04381 312 PANTHER VINORINE SYNTHASE-RELATED 1 311 - -
Tsu08g04381 312 Gene3D - 1 66 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04381 Tsu-Chr8 61767161 61768292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04381 2 296 Monolignol Biosynthesis Gene Families AT5G48930 22.642 1.47e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04381 - - mtr:MTR_2g007880 495.738