Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04376 atgagagaCATTAGGAAAGTTGTGCATGGATTGAAACCAGCCCTAATGATGTTGATGGTTCAGATTGCATTTGCTTCTGTAAATATTCTCTACAAACTTACCATAAATGACGGAATGAGCGTCAGAGTCCTTACAGCTTATCGTCTTATTTTCGCGGCAGCTACCACAATTCCACTTGCTCTAATTTTTGAAAGgaAGAACAGACCAAAGCTAACTTGGAGGGTGGTTTTCATGTCATTTTTTTGTGGTCTATTTGGGGGAAGCTTATTCCAAAACCTTTATTTTGAGTCATTAGCATTGATATCTGCAACATTTGCTTCCGCTGTTTATAATCTCATTCCTGCTGTCACTTTTATCTTGGCCGTTTCTTTTGGTTTCGAAAGGTTGAATTTCCAAACGGCAGCAGGCAAAGCCAAGGTGTTAGGAACAATAACAGGAATTGGAGGGGCAATGATGCTAACATTTCTCAAAGGCATTGAAATTAACATTTGGACCTTCCACATTAACCTCCTACATAAGGGAAAAAATGGAACACTTAATGATGACTCTGGTAGTAAATTGTTGggtattttttttggtcttggaAGCTGCTTTTGTTTTGCATTATGGCTCATCATTCAGGCTAAGATGAGCAAAGAATATGAAGGACATTATTCAAGTACAGCATTGATGTCCTTTATGGGGGCAATTCAAGCAACTATTTTTGCCCTTTGTATTGAGAAAGATTGGAGCCAATGGAGGTTGGGTTGGAGTATTAGGCTTCTAACTTCAGCATATTCGGGAATTGTGGCCTCTGGTATAATGATTATTGTCATTGCATGGTGTGTAGGGATGAGAGGTCCACTGTATGCCTCTGTTTTCAATCCCCTTATGCTTGTGCTTGTGGCCATTGCTGGTTCCTTGATGTTGGATGAGAACTTATACTTAGGAAGTGTAATTGGAGCAGTGCTGATAATGATTGGATTGTACATGGTGTTATGGGGTAAGAgcaaagaaatgaaaaaagtgACTCATTTAGAAATCACTACAGAAGAAATTGACGAAATTAAGGTTGTTGTCATGCCTACCACTGTTGATCCGGAAAACATTAACAGTACCAATAGCAACAACAATCATACCAATAGTAAGAGCAACAACATTGTTGGCAAGATTCATGAACATGATAATGATTCATCAAAATGTGAACATGAAGGACAAGACACTGAAATTAATGGGAAACAAGAATTGGTTTCAATCCTTCAAGTGGAGGCTTGA 1254 0.3732 MRDIRKVVHGLKPALMMLMVQIAFASVNILYKLTINDGMSVRVLTAYRLIFAAATTIPLALIFERKNRPKLTWRVVFMSFFCGLFGGSLFQNLYFESLALISATFASAVYNLIPAVTFILAVSFGFERLNFQTAAGKAKVLGTITGIGGAMMLTFLKGIEINIWTFHINLLHKGKNGTLNDDSGSKLLGIFFGLGSCFCFALWLIIQAKMSKEYEGHYSSTALMSFMGAIQATIFALCIEKDWSQWRLGWSIRLLTSAYSGIVASGIMIIVIAWCVGMRGPLYASVFNPLMLVLVAIAGSLMLDENLYLGSVIGAVLIMIGLYMVLWGKSKEMKKVTHLEITTEEIDEIKVVVMPTTVDPENINSTNSNNNHTNSKSNNIVGKIHEHDNDSSKCEHEGQDTEINGKQELVSILQVEA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04376 417 MobiDBLite consensus disorder prediction 360 380 - -
Tsu08g04376 417 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016021|GO:0022857
Tsu08g04376 417 Pfam EamA-like transporter family 12 151 IPR000620 GO:0016020|GO:0016021
Tsu08g04376 417 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
Tsu08g04376 417 MobiDBLite consensus disorder prediction 360 400 - -
Tsu08g04376 417 MobiDBLite consensus disorder prediction 381 400 - -
Tsu08g04376 417 PANTHER WAT1-RELATED PROTEIN 12 342 - -
Tsu08g04376 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
Tsu08g04376 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04376 Tsu-Chr8 61702698 61705357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04376 11 369 Nodulin-like Gene Family AT1G25270 42.061 1.39e-99 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04376 - - gmx:100809587 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g04376 08 61702698 61705357 Tsu02g01544 02 13657394 13659613 PCT