Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04368 ATGGCTGAAATTCAACACCACCATGCAGCTACACTAGCTCGTAGTGAATCAAAAGTGTACAACATGGAtgtagaaaaagaagaagaaaaagattataCACAAAGAGCTCAATGGCTTAGAGCAGCTGTTTTAGGTGCTAATGATGGTATACTCTCAACAGCATCCTTAATGATGGGTGTTGGAGCCGTTACAAAAGATGTTAAGACAATGATTCTAACCGGAATTGCCGGTCTTGTAGCCGGTGCATGTAGCATGGCAATCGGTGAATTTGTGTCGGTTTATTCGCAATATGATATTGAGTATGCACAAATGAAAAGACAAGGAAATACTTCTCAGAAAGATAAATTACCTAACCCTTATTATGCCGCTTTTGCCTCGGCCGTTGCTTTTGCGGTCGGGGCCTTTGTGCCGTTACTAGGCGCTGCGTTTGTGAAAGATTATAAGGTTAGGTTGGGAGTTGTGGTTGGTGTTGTTAGTTttgctttgtttgtttttggttggTTAAGTGCTCTTCTTGGGAAAGCACCTTTGGTTAAGTCATGTTTGAGGGTTTTGATTGGTGGATGGTTAGCTATGTCTCTTACTTTTGGTTTAACTAAGCTTGTAAACCATGTTGTAGGTTGA 624 0.3862 MAEIQHHHAATLARSESKVYNMDVEKEEEKDYTQRAQWLRAAVLGANDGILSTASLMMGVGAVTKDVKTMILTGIAGLVAGACSMAIGEFVSVYSQYDIEYAQMKRQGNTSQKDKLPNPYYAAFASAVAFAVGAFVPLLGAAFVKDYKVRLGVVVGVVSFALFVFGWLSALLGKAPLVKSCLRVLIGGWLAMSLTFGLTKLVNHVVG 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04368 207 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 1 204 - -
Tsu08g04368 207 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 204 IPR008217 GO:0005384|GO:0030026
Tsu08g04368 207 Pfam VIT family 106 199 IPR008217 GO:0005384|GO:0030026
Tsu08g04368 207 Pfam VIT family 39 112 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04368 Tsu-Chr8 61610586 61611209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04368 14 202 Nodulin-like Gene Family AT3G43660 69.271 1.57e-95 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04368 K22736 - gmx:100811713 279.256