Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04357 ATGGGAGATAAGAATAACAATTACAATGTCAACCTTCCACCTGGATTTCGTTTTGATCCCACAGATGAAGAGCTTGTAGTTCATTTCCTTCAAAGAAAAACAACACTCTTACCTTGCCACCCTCATGTCATCCCTGATCTTCATCTATACTCATATGATCCATGGCAACTTCATgGTAGAGCTTTATTGGAGGGGGAAAAATGGTACTACTATAGTAGAAGGACACCAAATAGGGTAACTGATAATGGGTATTGGAAGGCAACAGGAATGGAAGAGGCAGTGATTTCTAGTACAAACAATAAGAAAGTTGGCATGAAGAAACATTTAGTGTTCCATGTTGGAGAATCCCCTGCTTCAAGTATCAAAACCAATTGGATAATGCAAGAATTTTGTCTATCAGACTCTGCTTCCTCCTCTGCCAAATCATCTAAAAGAAAATCACAATCAATCAAAGATTATAGTAAATGGGTGATATGTCGAGTATATGAGCAaaatgaagatggtgatgatggAATGGATCAGCTCTCTTATTTAGATGAAGTTTTCTTGTCATTAGATGATCTTGACGAAATAAGCTTACCAAATTATTAA 591 0.3536 MGDKNNNYNVNLPPGFRFDPTDEELVVHFLQRKTTLLPCHPHVIPDLHLYSYDPWQLHGRALLEGEKWYYYSRRTPNRVTDNGYWKATGMEEAVISSTNNKKVGMKKHLVFHVGESPASSIKTNWIMQEFCLSDSASSSAKSSKRKSQSIKDYSKWVICRVYEQNEDGDDGMDQLSYLDEVFLSLDDLDEISLPNY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04357 196 PANTHER NAC TRANSCRIPTION FACTOR 56 9 192 - -
Tsu08g04357 196 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 9 192 - -
Tsu08g04357 196 SUPERFAMILY NAC domain 9 164 IPR036093 GO:0003677|GO:0006355
Tsu08g04357 196 Pfam No apical meristem (NAM) protein 13 132 IPR003441 GO:0003677|GO:0006355
Tsu08g04357 196 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Tsu08g04357 196 ProSiteProfiles NAC domain profile. 12 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04357 Tsu-Chr8 61457248 61458450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04357 11 183 NAC Transcription Factor Family AT1G69490 40.884 6.88e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu08g04357 NAM 7.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04357 - - gmx:100170712 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01563 02 13787071 13788000 Tsu08g04357 08 61457248 61458450 PCT