Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04346 ATGAGTCAAGTTTTTAGTGATGGAGCTGTGGCAAGAGCCATGGATACAGAAGAAATAAATAGTAATCCAACTTCACGTAGACATGGTGCTGATGTTCTTCCACATATTCACAAAGTTTCAAGTCCTCCTAAGCAAACACTTTTCCAAGATTTCAAACATAATTTCAATGAAACTTTTTTCTCAGATGACCCTTTTGGCAAGTTTAAGGACCAAAAGGGTTCAAGAAAATTTGTTCTTGGATTACAAtctgtttttccaatttttgaTTGGGGAAGAGGTTACAATCTTAAAAGTTTTAAGGGTGATTTGATTTCTGGACTCACCATTGCTAGTCTTTGTATTCCACAGGATATTGCATATGCAAAGCTTGCACATTTGGACCCTCAATATGGACTTTATACTAGTTTTATTGCTCCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATTGCCATAGGACCAGTAGCTGTTGTGTCCCTCTTGCTTGGCACCTTGCTGTCAGATGAGATCAAAGACACCAAAAGTCATGAATACCTGCGTCTCGCATTTACTGCCACTTTCTTTGCAGGAATCACTCAAATGGCACTTGGACTTTTAAGGCTTGGTTTCTTGATTGATTTCCTATCTCATGCTGCAATTGTTGGATTCATGGGTGGAGCAGCCATTACTATTGCGCTCCAACAGCTTAAAGGACTTCTTGGCATAAAGAACTTCACTACAAAAACCGATATTATTTCTGTCATGAGATCCGTTTTTAGTGTCGCCCATCATGGGTGGAATTGGGAGACAATATTAATTGGACTATCATTCTTGGCTTTCCTTCTTACAACCAAATATATTGCtaagaagaaaaagaacctGTTTTGGGTGGCTGCAATATCTCCTATGATATGTGTTATAGTGTCTACTTTTTGTGTCTACATTACAAGGGCAGACAAAAAAGGAGTAGCAATTGTGAGACATATTAAAAAGGGTGTGAATCCAGCATCTGCTAGTGAAATATATTTCAGTGGAAATTATTTAAGTGCTGGTATTAGGATTGGTTTGATTTCTGGTATGGTAGCACTCACGgaaGCTGTGGCCATTGGAAGAACATTTGCTGCTATGAAAGACTATTCAATTGATGGTAACAGAGAAATGGTTGCACTAGGAACGATGAATGTTATTGGTTCCATGACATCTTGTTATGTTGCTACAGGATCATTTTCTCGCTCGGCTGTGAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATAGTTATGTCCTTTGTGTTGTTGTTAACTTTGTTAGTGATTACACCACTATTCAAGTACACTCCAAATGCAGTGCTTGCCTCAATTATCATAGCTGCTGTGTTGAACCTGATTGACATTAAAGCAGCTATTCTTCTTTGGAAGATTgacaaatttgattttctagCTTGCATGGGAGCCTTCTTTGGTGTCATCTTCAAAAGTGTTGAGATTGGCCTTCTAATCGCGGTGGCAATATCTTTTGCCAAAATTCTTTTACAAGTGACAAGGCCCAGGACTGCAGTACTTGGGAAGCTTCCAGGTACAGCGGTTTATAGGAACGTCCTACAATATCCCAAAGCAGCACAAATTCCCGGCATGCTGATTGTCAGGGTTGATTCTGCAATCTACTTTTCAAATTCCAACTACATCAAGGACAGAATATTGAAGTGGCTGACCGATGAAGAGATTCTAAGGACATCAAGTGAATATCCAAGTATACAGTATCTCATCGTTGAAATGTCGCCTGTTACTGATATCGACACTAGTGGCATCCATGCCTTTGAAGATTTACTTAAGAGCCTCAAGAAAAGGGATGTTCAGCTTCTCGTGGCGAATCCGGGACCAATTGTAATTGAGAAGTTTCATGCATCAAAGTTAACAGGCTTAATCGGAGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTTCAACTTTTGGTGGAAAGGGTGCTGGTGGAAAGAGTGCAGATTCATGA 1998 0.3849 MSQVFSDGAVARAMDTEEINSNPTSRRHGADVLPHIHKVSSPPKQTLFQDFKHNFNETFFSDDPFGKFKDQKGSRKFVLGLQSVFPIFDWGRGYNLKSFKGDLISGLTIASLCIPQDIAYAKLAHLDPQYGLYTSFIAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLSDEIKDTKSHEYLRLAFTATFFAGITQMALGLLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGIKNFTTKTDIISVMRSVFSVAHHGWNWETILIGLSFLAFLLTTKYIAKKKKNLFWVAAISPMICVIVSTFCVYITRADKKGVAIVRHIKKGVNPASASEIYFSGNYLSAGIRIGLISGMVALTEAVAIGRTFAAMKDYSIDGNREMVALGTMNVIGSMTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSFVLLLTLLVITPLFKYTPNAVLASIIIAAVLNLIDIKAAILLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTAVYRNVLQYPKAAQIPGMLIVRVDSAIYFSNSNYIKDRILKWLTDEEILRTSSEYPSIQYLIVEMSPVTDIDTSGIHAFEDLLKSLKKRDVQLLVANPGPIVIEKFHASKLTGLIGEDKIFLTVGDAVSTFGGKGAGGKSADS 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04346 665 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Tsu08g04346 665 PANTHER SULFATE TRANSPORTER 20 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu08g04346 665 Pfam STAS domain 531 649 IPR002645 -
Tsu08g04346 665 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
Tsu08g04346 665 Pfam Sulfate permease family 99 478 IPR011547 GO:0016021
Tsu08g04346 665 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Tsu08g04346 665 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Tsu08g04346 665 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 20 658 - -
Tsu08g04346 665 Gene3D STAS domain 510 654 IPR036513 -
Tsu08g04346 665 TIGRFAM sulP: sulfate permease 86 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04346 Tsu-Chr8 61375430 61379822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04346 15 656 Inorganic Solute Cotransporters AT1G22150 71.695 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04346 K17470 - gmx:100784124 1038.1