Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04345 ATGGCCATGGAGATGGAAGAAATAAAAAGCAATTCTTCTTCACGTATACATGGTGATGATATTCTTCCACATATTCATCACAAAGTTGCATCTCCTCCTAAGCAAACACTTTTCCAAGATATCAAACATACTTTCAATGAAACTTTTTTCTCAGATGACCCTTTTGGCAAGTTTAAGAATCAAACAGTATCAAGAAAGTTTGTTCTTGGACTACAAtctgtttttccaatttttgaTTGGGGAAGAGGTTACAACCTTAAAAGTTTTAAGGGTGATTTGATTGCTGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGACATTGCATATGCAAAGCTTGCACATTTGGAACCTACATATGGACTTTATACTAGTTTTGTTGCACCTCTTGTGTATGCTTTCATGGGAAGTTCAAGAGATATTGCCATAGGACCAGTAGCTGTTGTGTCCCTCTTGCTTGGCACCTTGCTGTCAGATGAGATCAGTGACACCAAAAGTCATGAATACCTGCGTCTCGCATTTACTGCCACTTTCTTTGCAGGAATCACTCAAATGGCACTTGGACTTTTAAGGCTTGGTTTCTTGATTGATTTTCTATCTCATGCTGCAATTGTTGGATTCATGGGTGGAGCTGCCATTACTATTGCACTCCAACAGCTTAAAGGTCTTCTTGGCATAAAGGACTTCACTACAAAAACCGATATTATTTCTGTCATGAAATCCGTTTTTAGTGCTGCCCACCATGGGTGGAATTGGGAGACAATAGTAATTGCACTATCATTCTTGGCTTTCCTTCTTACAACCAAATATATTgctaagaagaacaagaaactcTTTTGGGTGGCTGCAATATCTCCTATGATATGTGTTATAGTGTCTACTTTTTGTGTCTACATTACAAGGGCAGACCAAAAAGGAGTAGCAATTGTGAGACATATTAAAAGGGGTGTGAATCCAGCATCTGCTAGTGATATATATTTCAGTGGAAATTACTTAAGTGCTGGTATTAGAATTGGTGTGATTGCTGGTATGGTAGCGCTCACGgaAGCTGTGGCCATTGGAAGAACATTTGCTGCTATGAAAGACTATTCAATTGATGGTAACAGAGAAATGGTGGCACTAGGAACGATGAATGTTATTGGTTCCATGACATCTTGTTATGTTGCTACAGGATCCTTTTCTCGCTCGGCTGTTAACTACATGGCTGGTTGTAAAACTGCTGTGTCAAACATAGTTATGTCCATTGTGTTGCTGTTGACTTTGTTACTGATTACACCGCTATTCAAGTACACTCCAAATGCAGTGCTTGCCTCAATTATCATAGCTGCCGTGTTGAACCTGATTGACATTAAAGCAGCTATTCTTCTTTGGAAGAttgataaatttgattttctagCTTGCATGGGAGCCTTCTTTGGTGTCGTCTTCCATAGTGTTGAGATTGGCCTTCTAATCGCGGTAGCAATATCTTTTGCGAAAATTCTTTTACAAGTCACAAGGCCAAGGACTGTAGTACTTGGGAAGCTTTCAGGAACAACTGTTTATAGGAATATCCTACAATATCCCAAAGCTGAACAGATTCCTGGCATGCTGATTGTCAGGGTTGATTCTGCAATCTACTTTTCAAATTCCAACTACATCAAGGACAGAATATTGAAATGGCTGACTGATGAAGAGATTCTAAGGACATCAAGTGAATATCCAAGTATACAGTATCTCATTGTTGAAATGTCACCTGTTACTGATATTGACACTAGCGGCATCCATGCCTTTGAAGATTTACTTAAAAGCCTCAAGAAAAGAGATGTTCAGCTTCTCTTGGCAAATCCGGGACCAATTGTAATTGAAAAGCTCCATGCATCAAAAATATCAGACTTAATAGGGGAAGATAAAATATTTCTAACAGTAGGTGATGCTGTTGCAACTTTTGGTCCAAAGGGTGCAAATTTATGA 1953 0.381 MAMEMEEIKSNSSSRIHGDDILPHIHHKVASPPKQTLFQDIKHTFNETFFSDDPFGKFKNQTVSRKFVLGLQSVFPIFDWGRGYNLKSFKGDLIAGLTIASLCIPQDIAYAKLAHLEPTYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTLLSDEISDTKSHEYLRLAFTATFFAGITQMALGLLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGIKDFTTKTDIISVMKSVFSAAHHGWNWETIVIALSFLAFLLTTKYIAKKNKKLFWVAAISPMICVIVSTFCVYITRADQKGVAIVRHIKRGVNPASASDIYFSGNYLSAGIRIGVIAGMVALTEAVAIGRTFAAMKDYSIDGNREMVALGTMNVIGSMTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSIVLLLTLLLITPLFKYTPNAVLASIIIAAVLNLIDIKAAILLWKIDKFDFLACMGAFFGVVFHSVEIGLLIAVAISFAKILLQVTRPRTVVLGKLSGTTVYRNILQYPKAEQIPGMLIVRVDSAIYFSNSNYIKDRILKWLTDEEILRTSSEYPSIQYLIVEMSPVTDIDTSGIHAFEDLLKSLKKRDVQLLLANPGPIVIEKLHASKISDLIGEDKIFLTVGDAVATFGPKGANL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04345 650 Pfam STAS domain 521 639 IPR002645 -
Tsu08g04345 650 SUPERFAMILY SpoIIaa-like 522 644 IPR036513 -
Tsu08g04345 650 ProSiteProfiles STAS domain profile. 520 643 IPR002645 -
Tsu08g04345 650 CDD STAS_SulP_like_sulfate_transporter 521 636 - -
Tsu08g04345 650 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 9 649 - -
Tsu08g04345 650 Pfam Sulfate permease family 89 468 IPR011547 GO:0016021
Tsu08g04345 650 ProSitePatterns SLC26A transporters signature. 118 139 IPR018045 GO:0008271|GO:0008272
Tsu08g04345 650 TIGRFAM sulP: sulfate permease 76 639 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu08g04345 650 Gene3D STAS domain 500 644 IPR036513 -
Tsu08g04345 650 PANTHER SULFATE TRANSPORTER 9 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04345 Tsu-Chr8 61363729 61367647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04345 23 646 Inorganic Solute Cotransporters AT1G22150 73.280 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04345 K17470 - gmx:100784124 1035.02