Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04335 atggaggGTAGTTTGTTTAAGGTTGTGTTTCTTTTGCTTGTGTTAGGTCTTGTGAACACACTAGTGCATGGCCAAGGGACACGTGTAGGATTCTATTCGAGTACATGTTCTCAAGCTGAATCCATTGTTAAGTCGACAGTTGCAGCTCATGTTAACTCTGATTCTACTTTGGCTCCTGCATTACTTAGGATGCATTTTCATGATTGCTTTGTCCAAGGTTGTGATGCCTCGGTTCTCATTTCGGGCTCAGGTGCCGAAAAAACTGCATTTGCAAACCTTGGTTTAAGAGGTTATGAAGTTATTGATGATGCAAAGACAAAGCTCGAGACTGCGTGTCCTGGTATTGTCTCTTGTGCTGATATTGTTGCCCTTGCCGCTCGTGATTCCGTTGTTTTGAGTGGTGGACTGAGTTGGCAAGTGCCTACTGGACGCAGAGACGGACGCGTGTCACAGGCTTCCGATGCAAATGATTTGCCTCGTCCTACTGATTCTGTTGAtgtgcaaaaacaaaaatttgcaACAAAAGGCCTTAATGCTCAAGACCTTGTCACCTTAGTTGgtgGACATACAATTGGTACTACTGCATGTCAATTCTTCAGTAACAGATTGTACAATTTCACTACAAATGGTGCTGCTGACCCTTCCATTGACCCTTCATTTGTGTCACAATTACAAACATTATGCCCTCAAAACAGTGGTGCTACAAACAGAGTTGCATTTGATACTGGAAGTCAAAACAAATTTGATAATTCTTACTATGCTAATTTGAGAAACGGACGTGGAATTCTTCAATCAGATCAAGCATTGTGGAATGATACTTCCACAAAGATCTTTGTGCAAAGATACCTAGGTTTAAGAGGGTTGCTTGGATTAACATTTAATGTTGAATTTGGAAGATCCATGGTGAAGATGAGCAACATTGGAGTTAAGACTGGTACCGATGGTGAAATCCGCAAGATATGTTCTGCTttcaactaa 978 0.4008 MEGSLFKVVFLLLVLGLVNTLVHGQGTRVGFYSSTCSQAESIVKSTVAAHVNSDSTLAPALLRMHFHDCFVQGCDASVLISGSGAEKTAFANLGLRGYEVIDDAKTKLETACPGIVSCADIVALAARDSVVLSGGLSWQVPTGRRDGRVSQASDANDLPRPTDSVDVQKQKFATKGLNAQDLVTLVGGHTIGTTACQFFSNRLYNFTTNGAADPSIDPSFVSQLQTLCPQNSGATNRVAFDTGSQNKFDNSYYANLRNGRGILQSDQALWNDTSTKIFVQRYLGLRGLLGLTFNVEFGRSMVKMSNIGVKTGTDGEIRKICSAFN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04335 325 MobiDBLite consensus disorder prediction 143 163 - -
Tsu08g04335 325 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 ProSiteProfiles Plant heme peroxidase family profile. 26 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 Pfam Peroxidase 43 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PANTHER PEROXIDASE 25-RELATED 6 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 Gene3D Peroxidase, domain 2 159 304 - -
Tsu08g04335 325 Gene3D - 30 325 - -
Tsu08g04335 325 PANTHER PEROXIDASE 6 323 - -
Tsu08g04335 325 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Tsu08g04335 325 SUPERFAMILY Heme-dependent peroxidases 28 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu08g04335 325 CDD secretory_peroxidase 28 324 IPR033905 GO:0004601|GO:0042744
Tsu08g04335 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04335 Tsu-Chr8 61301940 61303595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04335 8 325 Peroxidase AT2G41480 60.815 3.76e-146 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04335 K00430 - gmx:100820620 493.426