Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04331 ATGGCTTCAACTTCCAATATTGTGCTATTAGTTTCTATATTACTAGCAATTCTTGTTGCTTTGCAGTTCAAGGATGCTAAATGTTTCAAGACTTTTCCTACCAGAGTAACTGTATATGTTACCAACAACATAACCGGAAATTATCAGCTTGGTGTTGAGTGTAAAGACAAGCATGATGATTTTGGATATAAAATCCTACaatttaaagaaaattacaCGTTCTCTCTTAAGCCAACATTCTTAATACcaaataaattatacttttgTAGTTTTTCATGGATTAACGGAGCTAAACATTTTGACATTTATGATCAAAAACGTGATGAGGATGATTGCGACGAAGAATGTCGTTGGCAAATAAATGACTATGGACCGTGTAAGGAGAAAGCTGGATCTATACAATGTTTTCAATGGAATCCTGATGTTGTTGAAGGACATAGGCTAAGTGGTGAAAggaataataatcataatatgTAA 477 0.3124 MASTSNIVLLVSILLAILVALQFKDAKCFKTFPTRVTVYVTNNITGNYQLGVECKDKHDDFGYKILQFKENYTFSLKPTFLIPNKLYFCSFSWINGAKHFDIYDQKRDEDDCDEECRWQINDYGPCKEKAGSIQCFQWNPDVVEGHRLSGERNNNHNM 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04331 158 Pfam Plant self-incompatibility protein S1 37 138 IPR010264 -
Tsu08g04331 158 PANTHER S-PROTEIN HOMOLOG 18-RELATED 10 138 - -
Tsu08g04331 158 PANTHER - 10 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04331 Tsu-Chr8 61269740 61270216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04331 35 139 Carbohydrate Esterase AT3G16970 34.234 1.60e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04331 - - mtr:MTR_2g008690 170.629