Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04328 ATGCGGGAATACCTGGAACGTCTTATAGATGCTCGATTCGGATACAAAGATACTTGGGAAATTCTAAAGAAAAACCTTAATATTTTCGGGCACTCTAAACGCATGAATGCCCGGGAGAATGTTATGAATGCTCGGCACGCCCAGAAGAAGTTGAATCAGAAGAAGAAAGGCTTGGAATCTGGAGTGGATCGTTGGAATGAGATGTACGAGTCGCTGGAAGTTCAGAGAGTAGCCAAAGGGTCTGGAAGTTGGATAGCTAAAATGagaagaattttgaaaaaatccctccacttccctATATATAAGGTAATTCTCGGTGGACGCACCTGCTCGAACTTTAAGGCGCCACCCCAATCTGAACCATTGCATCAATCCAACGGCCACGATGAAAGACAATCCAACGGTCCAGGTACGACCATCGCAAAAACCAAAGGGCGCGAAGATCCAACGGTCAGGAAACCTCCTCGTCGTTCGAACCCAACGAGTAGGTACTCAAGTACTGTCAGgTTTGCAGATTGTAAAACTGATTATCCCATTCATCTAATCTTTCCACCCAGAGTTCACGAATACATTACTAACAACATAAGCAATACTGCACTCGGAGTTCATTGTAAAGACAAAAACAATGATGCTGGTTTTCGTTCAATAAATTTTGGAGGAACTTATGCATTTGATTTTCAGCCAAATAGATTTATTCATAATACCTTATGGTTTTGTCGATTTTCATGGAATAATCAAGTTCGATACTTTGATATTTATATAGAAAAACGTGATATCAATATTTGTGTTAAAGAATGTCATTGGGCAATAAATAAATCTGGACCATGTAGGGTTAAAGACAATTCTTCAGAATGTTTTCCTTGGAATCCATAA 873 0.3849 MREYLERLIDARFGYKDTWEILKKNLNIFGHSKRMNARENVMNARHAQKKLNQKKKGLESGVDRWNEMYESLEVQRVAKGSGSWIAKMRRILKKSLHFPIYKVILGGRTCSNFKAPPQSEPLHQSNGHDERQSNGPGTTIAKTKGREDPTVRKPPRRSNPTSRYSSTVRFADCKTDYPIHLIFPPRVHEYITNNISNTALGVHCKDKNNDAGFRSINFGGTYAFDFQPNRFIHNTLWFCRFSWNNQVRYFDIYIEKRDINICVKECHWAINKSGPCRVKDNSSECFPWNP 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04328 290 PANTHER S-PROTEIN HOMOLOG 18-RELATED 179 288 - -
Tsu08g04328 290 MobiDBLite consensus disorder prediction 112 140 - -
Tsu08g04328 290 Coils Coil 34 54 - -
Tsu08g04328 290 Pfam Plant self-incompatibility protein S1 190 288 IPR010264 -
Tsu08g04328 290 MobiDBLite consensus disorder prediction 112 165 - -
Tsu08g04328 290 PANTHER - 179 288 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04328 Tsu-Chr8 61249355 61253573 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04328 185 289 Carbohydrate Esterase AT3G16970 39.286 4.06e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04328 - - mtr:MTR_6g014730 161.77