Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04320 ATGTCGGAGGAAAGTAGCGAAATCAATGGCGGATTCTCGATGGATTCATCTGAATCACGATGGGTTTTCCAtgaggatgaagatgatgacGTGTCCGATATAGAAGAATACCATGCTGATTTGAGATTCAGAGGACGCGCTACTGTACCtgattcagaagatgaagataacGCTGAACAAAAACTCATTCGAACTGGTCCTCGAATCGATTCTTTCGATGTTGAAGCTCTTGAGATTCCTGGTGCTCACAGAAGTGACTATGAGGATATCAGTGtaggaaagaaaattatattggcTTTTCAGACTCTTGGCGTAGTCTTTGGTGATGTTGGAACCAGTCCGTTATATACATTTAGTGTTATGTTTAGAAAGGCTCCTATAAATGAAAATGACGACATTCTTGGAGCATTATCACTTGTCTTGTATACTTTAATCTTGATTCCTTTGGTGAAGTATGTCCTGGTTGTTCTGTGGGCCAATGATAATGGTGAAgGTGGTACTTTTGCCTTGTACTCCTTGATTTGTCGTCATGCCAAGGTGAGTCTTCTCCCCAACCAGTTAGCATCAGACGCCCGTATATCAAGCTTTAGGCTGAAGGTGCCATCCCCTGAGCTTGAAAGGTCATTAAAAATCAAGGAAAGACTTGAGTCTTCTCTGACTCTGAAGAAGACGCTACTGATATTAGTGCTTGCTGGTACTTCTATGGTGATTGCTAATGGTGTTGTAACACCAGCAATGTCAGTATTGTCCTCTGTTGGTGGTTTAAATGTTGGGATAGCTGCAATCAAGCAAGATGAAGTGGTGATGATTTCAGTTGCCTGCCTGATTGTTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTGGGACTTGCAGTAGGACCTGCTTTGTTCATATGGTTTTGTTCTCTTGCGGGTATTGGGATATACAATCTTGTCAAATATGACAGGAGTGTCTTGAGGGCATTTAATCCTATTCATATCTACTATTTCTTCAAGAGGAACTCAACTAAAGCATGGTATTCTCTTGGGGGTTGTCTTCTGTGTGCAACTGGTTCTGAAGCCATGTTTGCAGATCTTTGCTACTTTTCTGTACGATCAGTGCAGCTTACGTTTGTCTTTCTTGTTTTGCCGTGCCTGCTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGGAAACCATGCTGATGCTGGTCAGGCCTTTTATTCTTCTGTTCCGAGTGGTGCATTCTGGCCAACTTTCCTTATTGCTAACATTGCGGCACTGATTGCAAGTCGTGCTATGACAACAGCAACATTTTCATGTATAAAGCAATCAACTGCACTTGGTTGTTTCCCTCGTCTTAAAATCATTCACACCTCCCGGAAATTTATGGGCCAGATCTATATCCCTGTCCTAAACTGGTTTCTCCTGGCTGCTTCGCTGGTGCTTGTCTGCTCCATATCAAGCCTCGATGAGATTGGAAATGCCTATGGAATTGCTGAGATGGGGGTGATGATGACGACCACTGTTTTATTAACCCTTGTTATGCTTCTTATATGGCAAATACGCATCATCATAGTGCTGTGTTTTGCGGTAGTCTTCTTGGGACTGGAGCTGACTTTCTTTTCATCTGTTCTATGGAGTGTGGCAGATGGAAGTTGGATAATATTGGTCTTTTCTGTAATAATGTTTCTTATAATGTATGTATGGAATTATGGAAGCAATCTCAAGTATGAAACTGAAGTCAAGCAAAAACTGTCGATGGATTTGATGCGAGAGTTAGGGTCTAATCTTGGGACAATACGTGCTCCTGGAATTGGTTTGCTTTATAACGAATTGGTCAAAGGAATACCAGCAATTCTTGGACATTTTCTGACTACACTTCCGGCAATTCACTCCATGATAATATTTGTGAGTATCAAGTATGTTCCGGTTCCTGTGGTGCCTCAAAGTGAAAGATTCCTTTTCCGGCGAGTCTGCCTCAAAAGTTATCATATATTTCGTTGTATTGCCAGATATGGTTACAAAGATGTTCGAAAAGAAAATCACCAGACTTTTGAGCAGATGCTGATTGAGAGCCTAGAGAAGTTTATACGCCGTGAGGCTCAGGAGAGATCACTAGAGAGTGATAGGGATGAAGATATCGATTCAGAGGATGAGTACTCTAGTTCTAGGGTTCTAATTGCTCCCAATGGGAGTGTTTACTCACTCGGGATTCCTCTTCTTTCCGATTTTAAGGATACAAGCAGCTCTGTTTTAGAAGCAAGCACATCCGAGGTGTTAAGCCCTACAGCGTCTGATTCCCCAGCGTTTGATGCTGAACAGAGCCTTGAGAGGGAGCTATCTTTTATTCACAAGGCTAAAGAATCTGGAGTTGTTTATCTTCTCGGTCATGGGGACATAAGAGCACGAAAGGAGTCTTGGTTTATCAAGAAGCTAGTAATAAACTATTTCTACGCCTTCTTGAGAAAGAACTGCAGGAGGGGGATCACAACTTTAAGTGTGCCCCATTCACATCTGATGCAAGTTAGCATGACTTACATGGTTTGA 2535 0.4114 MSEESSEINGGFSMDSSESRWVFHEDEDDDVSDIEEYHADLRFRGRATVPDSEDEDNAEQKLIRTGPRIDSFDVEALEIPGAHRSDYEDISVGKKIILAFQTLGVVFGDVGTSPLYTFSVMFRKAPINENDDILGALSLVLYTLILIPLVKYVLVVLWANDNGEGGTFALYSLICRHAKVSLLPNQLASDARISSFRLKVPSPELERSLKIKERLESSLTLKKTLLILVLAGTSMVIANGVVTPAMSVLSSVGGLNVGIAAIKQDEVVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCSLAGIGIYNLVKYDRSVLRAFNPIHIYYFFKRNSTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMGNHADAGQAFYSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAASLVLVCSISSLDEIGNAYGIAEMGVMMTTTVLLTLVMLLIWQIRIIIVLCFAVVFLGLELTFFSSVLWSVADGSWIILVFSVIMFLIMYVWNYGSNLKYETEVKQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAILGHFLTTLPAIHSMIIFVSIKYVPVPVVPQSERFLFRRVCLKSYHIFRCIARYGYKDVRKENHQTFEQMLIESLEKFIRREAQERSLESDRDEDIDSEDEYSSSRVLIAPNGSVYSLGIPLLSDFKDTSSSVLEASTSEVLSPTASDSPAFDAEQSLERELSFIHKAKESGVVYLLGHGDIRARKESWFIKKLVINYFYAFLRKNCRRGITTLSVPHSHLMQVSMTYMV 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04320 844 MobiDBLite consensus disorder prediction 1 16 - -
Tsu08g04320 844 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 23 843 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu08g04320 844 MobiDBLite consensus disorder prediction 1 28 - -
Tsu08g04320 844 Pfam K+ potassium transporter 99 672 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu08g04320 844 PANTHER POTASSIUM TRANSPORTER 23 843 - -
Tsu08g04320 844 TIGRFAM kup: potassium uptake protein 98 843 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04320 Tsu-Chr8 61179812 61187292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04320 3 844 Inorganic Solute Cotransporters AT5G09400 76.968 0.0 1308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04320 - - gmx:100788190 1417.52