Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04314 ATGCAATTGAATCGAGATTGTTATTCAATCATGTCATCTTCAATAGTTCTAATCCAAATTCCAACAACAATGGGTTCTGTTGTGACGCAAAAAATGcttttcaaacctctcaatatGAATTTCCCCTCCGTCAGAGCCGGCATCCAACAGCAGCTGAACCACCGCGTTCTCTTCCACAATTCTGTTATGCCGTTGCGGTGCTCAGCCTCAACTCCTACTCCTTCTGCTTCTTCTGATGATGCTATTGTTCTCAATGTTCGGGGAATGATGTGTGAGGGATGTGCTTCTAGCGTCAAAAAACTTCTAGAAACTCAACCACAAGTGTTATCTGCTACGGTGAATCTAACATCAGAGACAGCACTGGTCTCCCTATCGCCTTTGTTATCCGAAGAGAAAACTTCACCAAATTGGCAAAAGGAGTTAGGAGAAACACTTGCACACCATTTAACTACATGTGGTTTTACTTCTGCCCTTAGAGTGACAGGTCAGGAAGATAGCAACTAA 504 0.4167 MQLNRDCYSIMSSSIVLIQIPTTMGSVVTQKMLFKPLNMNFPSVRAGIQQQLNHRVLFHNSVMPLRCSASTPTPSASSDDAIVLNVRGMMCEGCASSVKKLLETQPQVLSATVNLTSETALVSLSPLLSEEKTSPNWQKELGETLAHHLTTCGFTSALRVTGQEDSN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04314 167 ProSitePatterns Heavy-metal-associated domain. 86 115 IPR017969 GO:0046872
Tsu08g04314 167 CDD HMA 83 132 IPR006121 GO:0046872
Tsu08g04314 167 ProSiteProfiles Heavy-metal-associated domain profile. 81 158 IPR006121 GO:0046872
Tsu08g04314 167 SUPERFAMILY HMA, heavy metal-associated domain 81 126 IPR036163 GO:0046872
Tsu08g04314 167 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 74 157 - -
Tsu08g04314 167 PANTHER ATP7, ISOFORM B 74 157 - -
Tsu08g04314 167 Gene3D - 80 162 - -
Tsu08g04314 167 Pfam Heavy-metal-associated domain 83 126 IPR006121 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04314 75 161 Primary Pumps ATPases AT4G33520 60.920 2.54e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04314 - K17686 mtr:MTR_7g116990 188.348