Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04290 ATGGTTAAGGCCCATGAGTCTTGGCCTTGCCCACAGCATGTGGCTTGGCCGTCACATGATTTGAACTGCGACGGCACGTTGCCGGATCCTAGTATGTGTGGTCATTCGGCAAATCTGAACCCTAGTACATGCACTTTTCCTTCTGTCAGTGCATTTCCGGGATTCACAACTCTTGCTACCCCAAGCCTGCAGACTGATCAAACCAATGAAGTGCAAGGGTTCCTTCAGGATCCCAAAGCAGAACCGTGTTTGAAAGAAACACATAATATTGGGGCTATGCAAAATGAAAATCCTTCTTTGCAGAAgaagtttattatttttgaccGGTCTGGTAATAAGACAAGGTTGTTTTATAGTCCTATCTTCTCACTTGTTCAGAGTCCAATTGTTACTACTACACAATTCACTCAAGCATGTGATGTAAATCTGGATGGACAGGCAACTAATTTTGGTCAGAAACATTTTCCGAAATACAGTTCACCCGAAGAGTCAGATCAGGATCATGTAGTTAACGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTGTTCTGATGATTATGATTCTGACGATGACGACGACGACGAGGAGGTAACAAGTACAGGCCATTCTCCATTGGCTAATCAAatgacttatttgatacaaGAACAAATCAAGGACACAAAGGAGGATGCTGCTAGCTCTGATTGGCCAAACAAAAGACATAAGTTAATTGATGGTAGGTACACAAGATTACCACCGCCTGTGGACAGTGCTAGTTcagtaaaacaaaacaaaccatGTGACAGTGCCAGTGATGCCGAGTCAAAGTATTCTTGTGGCGAAATGTATTTTGCCAGGCAAACTGAAAATGATAATTCAGCAGTTGGCGACATTCAATTGAAAAGGGATAAAATCCGTAAGACATTGAGAATTCTCGAGAACTTAACTCCTGGTGCAAAAGGAAAACATCCACTGCTAGTCATCGAAGAAACTATTGATTACTTAAAATCTTTGATGTCCCAAAGTGGCATGCTTGGGGTGAAATATCACTAA 1050 0.4 MVKAHESWPCPQHVAWPSHDLNCDGTLPDPSMCGHSANLNPSTCTFPSVSAFPGFTTLATPSLQTDQTNEVQGFLQDPKAEPCLKETHNIGAMQNENPSLQKKFIIFDRSGNKTRLFYSPIFSLVQSPIVTTTQFTQACDVNLDGQATNFGQKHFPKYSSPEESDQDHVVNEESEMHEDTEEINALLCSDDYDSDDDDDDEEVTSTGHSPLANQMTYLIQEQIKDTKEDAASSDWPNKRHKLIDGRYTRLPPPVDSASSVKQNKPCDSASDAESKYSCGEMYFARQTENDNSAVGDIQLKRDKIRKTLRILENLTPGAKGKHPLLVIEETIDYLKSLMSQSGMLGVKYH 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04290 349 MobiDBLite consensus disorder prediction 154 214 - -
Tsu08g04290 349 MobiDBLite consensus disorder prediction 245 271 - -
Tsu08g04290 349 MobiDBLite consensus disorder prediction 255 270 - -
Tsu08g04290 349 PANTHER TRANSCRIPTION FACTOR BHLH145 8 349 IPR037546 -
Tsu08g04290 349 PANTHER TRANSCRIPTION FACTOR SAC51 8 349 - -
Tsu08g04290 349 MobiDBLite consensus disorder prediction 158 184 - -
Tsu08g04290 349 MobiDBLite consensus disorder prediction 185 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04290 Tsu-Chr8 60868642 60872102 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04290 83 341 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 36.727 5.62e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04290 - - gmx:100778385 439.113