Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04289 atgggaGTTGAGAAGCAAGTTGTTCGACCTGGAAACGGTCCCAAGCCAAATCCTGGTCAGAACGTCACTGTTCACTGCACCGGTTACGGGAAAAACGGTGACCTTTCTCAGAAGTTCTGGAGCACAAAGGATCCTGGTCAGAATCCCTTCACTTTTAAAATCGGTCAAGGTTCTGTTATCAAAGGATGGGATGAAGGTGTCCTTGGTATGCAAATCGGCGAAATTGCTCGTCTTCGGTGCTCTCCTGATTATGCCTATGGTGCCGGTGGCTTTCCTGCTTGGGGAATACAGCCCAACTCTGTCTTGGAGTTTGAGATCGAGGTCTTAAGTGCACAATGA 339 0.4779 MGVEKQVVRPGNGPKPNPGQNVTVHCTGYGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVIKGWDEGVLGMQIGEIARLRCSPDYAYGAGGFPAWGIQPNSVLEFEIEVLSAQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04289 112 Gene3D - 1 112 IPR046357 GO:0003755
Tsu08g04289 112 PANTHER PEPTIDYLPROLYL ISOMERASE 1 111 - -
Tsu08g04289 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
Tsu08g04289 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 14 109 IPR001179 GO:0003755
Tsu08g04289 112 SUPERFAMILY FKBP-like 2 110 - -
Tsu08g04289 112 MobiDBLite consensus disorder prediction 1 23 - -
Tsu08g04289 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04289 Tsu-Chr8 60861468 60863299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04289 2 110 Calmodulin-binding Proteins AT5G48570 40.909 6.30e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04289 K01802 - gmx:100500283 220.705