Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04280 atggatggaCCAAACAGAGGAGAAGCTGAACGATGGTTATACACAGCAAACAAACTTCTGAGCGCGCGTGATCTACACGGTGCACGTTCATTTGCTATTCGGGCACGAGAATCCGACCCGAGATTTGAAGCAACGGAGCTTCTTCTCGCCGTTATCGATACTCTGTTAGCCGGTGAAGCGAGGATCAAAGAACATCTTGATTATTACGCCGTTCTTCAAATCATTCGTTATACTCAGAATATTGAGTATATCGCCGATCAATATCGCCGTCTTGCTATTCTCCTTGACCCTAACCGGAATCCTTTCGCTTATGCTGCTCATGCTTTTTCTCTTGTTCATGATGCTTGGTCGATTTTCTCAAATCCGCATAAGAAAGCTATTTATGATGAACAACTTCATTTTCTTACTCAACCGCCACCACCAccgcaacaacaacaacaaccaccaatTCAACCACCGCTGCAACAGCAACAGTTTTTTCAACCTCCTTCACCACCACCGCCGCCGCAACCGATTCAACCTCCTCAGGTTCAAGTTCAAGTGAATCAGAATCATAGTGAGAGTCATCAACAGAGGAAAAACCCTAGGTCATCTAATGAAGCTAGGGTAATTTATGAAGAGCAAAACAATGGGCCAAGTTATGACAATGCTGATGAGCCCAATGGGCCTAGGCCCAGGCCCGAACCTGCTGTGGATAGGCCGGGTGGAACTGACGGTGGAAGTTTCTGGACGGCGTGTCCTTACTGTTTTGGCATGTTTGAGTATCCTAAGGTTTATGAAGACTGTACTCTCCGGTGTCAGAATTGTAGGAGGGGGTTTCATGCGTTGGTGGTGCGGGCACCGCCGGAGTTAGGTGAAGATGATGGGGGGAATTCGTTTTGCAGCTTTGGGTATTTTCCTTTAGGGTTTACTGGGAATTTTAAGGATATTAGTGGGTCGGCTTCGGAATGGAACCCGATTTCTCCTTTGTTTCCTTGTCCTAGTAATTCTAAGAAGGATGCTAGGAAGGGGCCTGTTAGTTATTATGATCATGATACATGTGCAGCGTTTGCGGAGCTTTCGGATGAAACTGAAGATGAtactgatgatgatgattggaGGAGAGGGAATGGTACCTCAGGGAAGAAGATGAgtaggaggaggaggagaagaagGACTTTTGGTGGCAGTGCTGGTGAAGAAAGGAGACCGATTGATAGGCCGAGGAGGGTGGTTCATAATGGTAATGCTggaaatgataatgataatggtggtggtggtagtgATAATGTGGTTGATGGTGAGGCTGTTGATGCTGCTTCTGCGCCTAGAATGCTGTCAAATGTTGAAGCTAGTAAGAGAGCTGTGTTGAGTGGTTCGAGGAGGAGGGGTGCTGGAAATTTGGGTAAGTTGGATTTGAATGTGGAGTTTAGCAATGAGGTGGAAGaagctgctgctgctgctggaATGAAAGAAGGGAATGTGAATGGGACTGGAAATGCTGAAGATAATATTGAAGGAATTGGGTTTTTTGAAGGGCTTGATGAGTTCCTTAATAGCTTACCAATTCTTAATGTTGTTGCAGATGATAAGGTTAAGTGTCACTAG 1587 0.419 MDGPNRGEAERWLYTANKLLSARDLHGARSFAIRARESDPRFEATELLLAVIDTLLAGEARIKEHLDYYAVLQIIRYTQNIEYIADQYRRLAILLDPNRNPFAYAAHAFSLVHDAWSIFSNPHKKAIYDEQLHFLTQPPPPPQQQQQPPIQPPLQQQQFFQPPSPPPPPQPIQPPQVQVQVNQNHSESHQQRKNPRSSNEARVIYEEQNNGPSYDNADEPNGPRPRPEPAVDRPGGTDGGSFWTACPYCFGMFEYPKVYEDCTLRCQNCRRGFHALVVRAPPELGEDDGGNSFCSFGYFPLGFTGNFKDISGSASEWNPISPLFPCPSNSKKDARKGPVSYYDHDTCAAFAELSDETEDDTDDDDWRRGNGTSGKKMSRRRRRRRTFGGSAGEERRPIDRPRRVVHNGNAGNDNDNGGGGSDNVVDGEAVDAASAPRMLSNVEASKRAVLSGSRRRGAGNLGKLDLNVEFSNEVEEAAAAAGMKEGNVNGTGNAEDNIEGIGFFEGLDEFLNSLPILNVVADDKVKCH 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04280 528 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 527 - -
Tsu08g04280 528 MobiDBLite consensus disorder prediction 135 175 - -
Tsu08g04280 528 Pfam DnaJ domain 67 129 IPR001623 -
Tsu08g04280 528 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Tsu08g04280 528 SUPERFAMILY Chaperone J-domain 62 134 IPR036869 -
Tsu08g04280 528 MobiDBLite consensus disorder prediction 355 426 - -
Tsu08g04280 528 MobiDBLite consensus disorder prediction 201 216 - -
Tsu08g04280 528 MobiDBLite consensus disorder prediction 134 236 - -
Tsu08g04280 528 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 527 - -
Tsu08g04280 528 SMART dnaj_3 66 124 IPR001623 -
Tsu08g04280 528 CDD DnaJ 67 121 IPR001623 -
Tsu08g04280 528 MobiDBLite consensus disorder prediction 387 403 - -
Tsu08g04280 528 Gene3D DnaJ domain 65 164 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04280 Tsu-Chr8 60756339 60758192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04280 8 526 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.556 2.52e-98 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04280 - - cam:101509006 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01632 02 14375192 14380816 Tsu08g04280 08 60756339 60758192 PCT