Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04260 ATGGCTTCCGATAACAAAATGCTTGGAGAATTTGAGCTTGTTGACATTCCTCCTTCACCCAGAGGTATGCCTCAGATTGAGGTCACCTTTGACATTGATGCCAGTGGTATCGTTACCGTGTCAGCCAAAGATAAGTCCACTAGTAAAGAGCAACAAATCACTATTAGGTCGTCTGGTGGACTCTCAGATGACGAGATTGAGAAAATGGTCAAAGAAGCCGAGTTACATGCTCAGAAAGACCAAGAACGAAAGTTCCTTATTGATATTAGGAATAATGCAGATACTAGCATCTACAGCATTGAGAAGAGCTTAGGTGAATATAGAGACAAAGTTCCAAATGAAGTAGTCAAAGAGATCGAGGATGCAGTTTCAAATTTGAGAAGTGCGATGTTAAGAGATAATGCTGATGAAATTAAATCAAAGCTTGATGTTGCTAACAAAGCCGTGTCTAAGATTGGGGAGCACATGTCAGGCGGTTCTCATGGTGGAGACGAGGCTCCGGAGGCAGAATACGTGATCAAGTGA 525 0.4229 MASDNKMLGEFELVDIPPSPRGMPQIEVTFDIDASGIVTVSAKDKSTSKEQQITIRSSGGLSDDEIEKMVKEAELHAQKDQERKFLIDIRNNADTSIYSIEKSLGEYRDKVPNEVVKEIEDAVSNLRSAMLRDNADEIKSKLDVANKAVSKIGEHMSGGSHGGDEAPEAEYVIK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04260 174 PANTHER HEAT SHOCK PROTEIN 70KDA 1 165 IPR013126 GO:0005524|GO:0140662
Tsu08g04260 174 MobiDBLite consensus disorder prediction 1 20 - -
Tsu08g04260 174 Pfam Hsp70 protein 1 156 IPR013126 GO:0005524|GO:0140662
Tsu08g04260 174 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 94 IPR029047 -
Tsu08g04260 174 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 60 IPR029047 -
Tsu08g04260 174 MobiDBLite consensus disorder prediction 153 174 - -
Tsu08g04260 174 PANTHER HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL 1 165 - -
Tsu08g04260 174 Gene3D - 61 158 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04260 Tsu-Chr8 60573838 60574362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04260 4 159 Calmodulin-binding Proteins AT1G56410 40.373 1.84e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04260 K04043 - gmx:100814039 289.271