Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04256 ATGGAAAACTATTCATATCAATCATACCCAGATTCAGGTAACTCATCACCACGTTCTAGAGAAATCGACTTCGAAAATCCACCCACTGGAACATGGgaagatcaacaacaacaacaacaacaaaaccaaacaagcaGTTACAAAGCAAAATTCATGTGTAGCTACGGTGGCAAAATTCAACCAAGAACACACGACAATCAACTCTCTTACGTTGGTGGTGAAACTAAAATCCTAGCCGTTGATCGTAACATCAAGTTTTCTTTAATGATTTCAAAGCTCTGTTCTCTCATCGAAGCACCTGATGTTTCCTTTAAATATCAACTACCTGGTGAAGATCTCGATGCACTTATCTCAGTAACTAACGACGATGATCTTGATCatatgatgcatgaatatgATCGTCTCTTTCGTGCTTCCGCTAGACCCGCTCGTATGAGATTATTCCTTTTTGTTAACGATTCTGTTACTTCTTCTAATCAACCCGACCCGATTGATTCAATTAAACCGAGTAACGTTGATTATTTATTCGGAATTGAAAAGCCTGTTACCGTTGTTGCTCCACCACCTACCGCCGTTAAATTTCACGATCCTGTTCCTGAACCGGTCGCTCCGTTACCTGAATATCATAGTCATATTCGACCCGGTTTGAATCCATCTGATCGGGTTGTAGGTTCGGATCCGGGTTTGAATCATCCGCTTGAGATTCAGAGACAGTTACAACGGATGCAGATTGCGGAGAATGAACAAACTGGTTATCGGAGGAAAAGTGAAGATTATCCTTCCGGAGATTATTACGTTCAGAAAGTGCCGGAGAAATTTCCGGCGATGTCGAATTTCGCACCACagcaacaacagcagcagcatCAACCTGGTTATTGGCAAGAAAAGCCTGTTTCCGGTGAGGCTTATCCACCGGGAGTATCAGGAGGAGGTGATCCAGCGGTTTATATGGTTCCGGCACCGGGAACTTACTATCACGCGCCGGTGATGCGTCCACCGGCAACTCAAGGTTACTACGCGGTGCAACGAATGCCATCTGATGCTTACCGTGAAGCGCAAGTTTACGGCGGTGCCCCGCCGTCTAAACCGCCGTTTTCATCGGGAGTTTCGGCGACTTATGCACCGGCGCAGCCGGTTAAAGGTCCTGTCTATGGTGAAGGAATTAGTGTGGTTCGTTCGAGTGGGATACCGGATAATACGGTAAATTCGTACGCACAGGTGGCGTATGATAGTGCGAGTGGCAGACAAGTTTATTATAATGCACCGGGTGGTGTAGTACACGCGCCGCCGTACCAAGGAGTTGCTGCACCTGTTACTACAGATGTTAAAGTAATGAGCAAGATTTCTCAAGGTTCAGTGTGA 1362 0.4347 MENYSYQSYPDSGNSSPRSREIDFENPPTGTWEDQQQQQQQNQTSSYKAKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRNIKFSLMISKLCSLIEAPDVSFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLFRASARPARMRLFLFVNDSVTSSNQPDPIDSIKPSNVDYLFGIEKPVTVVAPPPTAVKFHDPVPEPVAPLPEYHSHIRPGLNPSDRVVGSDPGLNHPLEIQRQLQRMQIAENEQTGYRRKSEDYPSGDYYVQKVPEKFPAMSNFAPQQQQQQHQPGYWQEKPVSGEAYPPGVSGGGDPAVYMVPAPGTYYHAPVMRPPATQGYYAVQRMPSDAYREAQVYGGAPPSKPPFSSGVSATYAPAQPVKGPVYGEGISVVRSSGIPDNTVNSYAQVAYDSASGRQVYYNAPGGVVHAPPYQGVAAPVTTDVKVMSKISQGSV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04256 453 MobiDBLite consensus disorder prediction 1 46 - -
Tsu08g04256 453 CDD PB1_UP2 52 150 - -
Tsu08g04256 453 Gene3D - 69 153 - -
Tsu08g04256 453 Pfam PB1 domain 64 151 IPR000270 GO:0005515
Tsu08g04256 453 SUPERFAMILY CAD & PB1 domains 64 159 - -
Tsu08g04256 453 SMART PB1_new 63 152 IPR000270 GO:0005515
Tsu08g04256 453 MobiDBLite consensus disorder prediction 1 22 - -
Tsu08g04256 453 PANTHER OS05G0427100 PROTEIN-RELATED 1 446 - -
Tsu08g04256 453 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 446 - -
Tsu08g04256 453 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04256 Tsu-Chr8 60546746 60548477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04256 47 150 MAP Kinase Kinase Kinase AT5G57610 49.038 8.47e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04256 - - gmx:100780332 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01695 02 14959182 14961099 Tsu08g04256 08 60546746 60548477 PCT