Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04252 ATGAGCGAGGATGACAATGGAGAGACGAATGAAGTGAAAGAGGAAGACTTGCATAAGTTTATGTATCATAAGTGTGTGATTTTGGAAGGGTTGAGACGTCATCCACCGGCTCATTTTGTGGTGCCACATGCGATTACCGATGATATTGTTTTGAATGGTTATTTGGTGCCTAAAAATTGGACAGTGAATGTTATGGTGGCTGAGATGGGGTGGAATCCTTGTGTTTGGGAGGATCCAATGGAGTTTAAGCAAGAGAGATTTTTGAAGGATGAAACATTTGATATCACAAGGAGTAAAGAGATAAATATGGTGCTGTTTGGAGCTAGAGGAGAATTTGTCCAGGATATAATTTAG 354 0.4011 MSEDDNGETNEVKEEDLHKFMYHKCVILEGLRRHPPAHFVVPHAITDDIVLNGYLVPKNWTVNVMVAEMGWNPCVWEDPMEFKQERFLKDETFDITRSKEINMVLFGARGEFVQDII 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04252 117 Gene3D Cytochrome P450 3 109 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04252 117 SUPERFAMILY Cytochrome P450 8 103 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04252 117 Pfam Cytochrome P450 9 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04252 117 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 108 - -
Tsu08g04252 117 PANTHER CYTOCHROME P450 8 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04252 Tsu-Chr8 60519226 60519579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04252 8 108 Cytochrome P450 AT1G64940 58.416 1.18e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04252 K24184 - gmx:100788826 157.532