Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04251 ATGGAATCATCATGGTTCATAGCAATTGTCTCTTTCTgcatcatcttcctcatcagAGCCATATTCTCCGCCAAAATCACCACCAAAACAACCACCGCAACCCTCCCTCCTGGTCCACCATACATACCAATCATCACAACCATCTCATGGCTTCGAAGATCATTCTCCCAACTTGAACCATTTCTCAAATCCCTTCATAATAAATACGGTCCTATCATCACTCTCAGAATCGGTTCTCGTCCTGCAATTTTCATCGCCGACCGTTCCATTGCTCATCATGCTCTTATTCAAAACTCCTCTGTTTTCTCTGACCGCCCCAAAGCACTTCCCACCGCAAAAATCAATACCAGCAACCAACATAACATTAGTTCTGCTTCATATGGTCCTACATGGCGTACCCTCCGTCGTAACCTTGCTTCTGAGATGCTTCATCCTTCCAAACTCAAATCTTTCTCTGAAATTCGCAACTGGGTCTTGGAAACTCTCATCAACCGTCTTAAATCCGCTTCGGAATCAGATGATTCTGTTACGGTTGTTTCTCACTTTCATTATGCGATGTTTTGTTTACTGGTTTTCATGTGTTTTGGTGAAAGAGTTAACGATGAGATACTCAGTGACATTTTGCGTGTACAAAGGAATCATTTGTTGAGTATTAGCAGATTCAATGTTTTGAACTTTTGGCCTAGAGTTACGAAGATTTTGTTGTGGAAACGATGGGAGGAGTTTTTGAAAAAGCGTAAGGATCAAGAGGATGTTTTGCTTCCGTTGATAAGAGCGAGGAAGCAAGTTAAGGAGAGTGGATTGAACAATGTTAACAGTGTTGTTTCGTACGTTGATACTCTTTTGGAGTTGGAGTTGCCCGAGGAGAAACGTAAGCTGAGTGAAGATGAAATGATTACTCTTTGTTCGGAGTTTTTGTCAGGTGGGACGGATACTACTTCCACTGCTTTGCAGTGGATTATGGCGAATTTGGTGAAGCACCCGGACGTGCAGAGGAGGATTGTGGAGGAGATTAGGGATGTGATGGGTGGGGATGAAAATGGAGAGAAGAAGGAGGTGAAAGAGGAAGACTTGCATAAGTTTCCATATCTTAAGTGTGTGATTTTGGAAGGGTTGAGGCGTCATCCACCGGGGCATTTTGTGTTGCCACACGCGGTGTCTGAGGATGTTGTTTTGGATGGTTATTTGGTGCCTAAAAATGGGACAGTGAATTTTATGGTGGCTGAGATGGGGCGGGATCCTCGTGTTTGGGAGGATCCAATGGAGTTTAAGCCCGAGAGGTTTTTGAAGGATGAAACCTTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTACGGGAACTAAAGAGATAAAGATGATGCCATTTGGAGCTGGGAGGAGAATTTGTCCCGGATATAATTTGGCTTTGCTTCATTTGGAATATTTTGTGGCTAATTTGGTTTGGAATTTTGATTGGAAGGTTCCGGAGGGTGGGCATGTGGATTTGTCGGAGAAACAAGAATTCACCATTGTCATGAAAAATCCATTGCAGGTTCATATTTCTCCTAGGATCTAG 1734 0.3754 MESSWFIAIVSFCIIFLIRAIFSAKITTKTTTATLPPGPPYIPIITTISWLRRSFSQLEPFLKSLHNKYGPIITLRIGSRPAIFIADRSIAHHALIQNSSVFSDRPKALPTAKINTSNQHNISSASYGPTWRTLRRNLASEMLHPSKLKSFSEIRNWVLETLINRLKSASESDDSVTVVSHFHYAMFCLLVFMCFGERVNDEILSDILRVQRNHLLSISRFNVLNFWPRVTKILLWKRWEEFLKKRKDQEDVLLPLIRARKQVKESGLNNVNSVVSYVDTLLELELPEEKRKLSEDEMITLCSEFLSGGTDTTSTALQWIMANLVKHPDVQRRIVEEIRDVMGGDENGEKKEVKEEDLHKFPYLKCVILEGLRRHPPGHFVLPHAVSEDVVLDGYLVPKNGTVNFMVAEMGRDPRVWEDPMEFKPERFLKDETFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITGTKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVWNFDWKVPEGGHVDLSEKQEFTIVMKNPLQVHISPRI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04251 577 Gene3D Cytochrome P450 28 577 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 PANTHER CYTOCHROME P450 501 575 - -
Tsu08g04251 577 PRINTS P450 superfamily signature 522 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 PRINTS P450 superfamily signature 513 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 PANTHER CYTOCHROME P450 5 432 - -
Tsu08g04251 577 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 501 575 - -
Tsu08g04251 577 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 432 - -
Tsu08g04251 577 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 515 524 IPR017972 GO:0005506|GO:0016705
Tsu08g04251 577 SUPERFAMILY Cytochrome P450 36 576 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 Pfam Cytochrome P450 508 568 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 Pfam Cytochrome P450 36 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 PRINTS E-class P450 group I signature 512 522 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04251 577 PRINTS E-class P450 group I signature 522 545 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04251 Tsu-Chr8 60512842 60514615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04251 504 576 Cytochrome P450 AT1G64940 64.384 1.13e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04251 K24184 - gmx:100795683 584.334