Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04250 ATGGAGTCATCATGGTTCATAGCACTTGTTTCTCTATGCATCATCTTCCTCATTAGAGCCATCTTCTCCACCAAAACAACCACCGCAACCCTTCCTCCTGGTCCACCACACATACCAATCATCACAACCATCCTATGGCTTCGAAAATCATTCTCCCAAATCGAACAATTACTCAAAACCCTCCACACCAAATATGGTCCTATCATCGCTCTCAGAATCGGTTCTCATACTTCCATTTTCATCGCCGACCATTCCATCGCTCACCAAGCTCTCATTCAAAACTCCTCTGTTTTCTCTGATCGCCCCAAAGCTCTTCCCACTGCCAAAATCAGTACCAGCAACCAACATAACATCAGTTCTGCTTCATATGGTCCTACATGGCGTACCCTCCGTCGTAACCTTGCTTCTGAGATGCTTCATCCTTCCAAACTCAAATCTTTCTCCGAAATTCGTAACTGGGTCTTGGAAACTCTCATCAACCGTCTCAAATCCGCTTCGGAATCAGATAATTCTGTTACGGTGGTTTCTCACTTTCATTATGCTATGTTCTGTTTACTGGTTTTCATGTATTTTGGTGAAAGAGTTGATGATGAGATACTCGGTGACATCTTGCGTATACAAAGGAATCATTTGTTGAGTATTAGCAGattcaatattttgaatttcTGGCCTAGAGCTACCAAGATTTTGTTGCGGAAACGATGGCAGGAGTTTTTGAAATTGCGTAAGAATCAAGAGGATGTTTTGCTTCCGTTGATAAGAGCGAGGAAGCAAGTTAAGGAGAGTGGATTGAACAATGTTAACAGTGTTGTTTCGTATGTTGATACTCTTTTGGAGTTGGAGTTGCCCGAGGAGAAACGTAAGCTGAGTGAAGATGAAATTGTTAGTCTTTGTTCGGAGTTTTTGTCAGCTGGGACAGATACTACTTCCACTGCTTTGGAGTGGATTATGGCGAATTTGGTGAAGCACCCGGACGTGCAGAGGAGGATTGTGGCGGAGATTAGGGATGTGATGGGTGGGGATGAAAATGGAGAGAAGAAGGAAGTGAAAGAGGAAGACTTGCATAAGTTTCCGTATCTTAAGTGTGTGATTTTGGAAGGGTTGAGGCGTCATCCACCGGGGCATTTTGTGTTGCCACATGCGGTGACTGAGGATGTTGTTTTGGATGGTTATTTGGTGCCTAAAAATGGGACAGTGAATTTTATGGTGGCTGAGATGGGGCGGGATCCTCGTGTTTGGGAGGATCCAATGGAGTTTAAGCCCGAGAGGTTTTTGGAGGATGAAACGTTTGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGGCTAATTTGGTTTGGAATTTTGATTGGAAGGTTCCGGAGGGGGGACACGTCGATTTGTCCGAAAAACAAGAATTCACCATTGTCATGA 1422 0.4262 MESSWFIALVSLCIIFLIRAIFSTKTTTATLPPGPPHIPIITTILWLRKSFSQIEQLLKTLHTKYGPIIALRIGSHTSIFIADHSIAHQALIQNSSVFSDRPKALPTAKISTSNQHNISSASYGPTWRTLRRNLASEMLHPSKLKSFSEIRNWVLETLINRLKSASESDNSVTVVSHFHYAMFCLLVFMYFGERVDDEILGDILRIQRNHLLSISRFNILNFWPRATKILLRKRWQEFLKLRKNQEDVLLPLIRARKQVKESGLNNVNSVVSYVDTLLELELPEEKRKLSEDEIVSLCSEFLSAGTDTTSTALEWIMANLVKHPDVQRRIVAEIRDVMGGDENGEKKEVKEEDLHKFPYLKCVILEGLRRHPPGHFVLPHAVTEDVVLDGYLVPKNGTVNFMVAEMGRDPRVWEDPMEFKPERFLEDETFDXXXXXXXXXXXXXWLIWFGILIGRFRRGDTSICPKNKNSPLS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04250 473 Gene3D Cytochrome P450 24 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04250 473 PANTHER CYTOCHROME P450 5 428 - -
Tsu08g04250 473 Pfam Cytochrome P450 32 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04250 473 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04250 473 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04250 473 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04250 473 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04250 473 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04250 473 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 428 - -
Tsu08g04250 473 SUPERFAMILY Cytochrome P450 32 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04250 Tsu-Chr8 60509665 60511181 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04250 3 427 Cytochrome P450 AT1G64940 55.889 4.47e-175 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04250 K24184 - gmx:100792037 590.497