Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04234 ATGGAGACTAATTTCTTATGGTTCTCCATATTTTTAAGTCTTATAATTTTGATCCTAAGTGTGGcaaagagaataaaaagtaGTGACAAAATTACCTCAAATCTTCCTCCTGGGCCTTGGATGCTACCAATTTTTGGAAGCATACACCACCTAATTGGCTCCTTACCCCACCATAGAATGAGGGAATTGTCCCAAAAATATGGTCCAATCATGCACCTACAACTTGGAGAAACTACAACCATAATAATTTCTTCTAAAGAAATTGCGAAAGAAGTGTTGAAAATCAATGATGTTTCATTTGCTCAAAGACCTAGATTACTTGGTTCAGAAATTATTACTTATGGTTGCACTAACATTGCTTTTGCACCCTATGGAGATTATTGGAGACAACTAAGAAAAATATGCACATTGGAACTATTAAGTGCTAAACGTGTGAAATCATTTCAATCAATTAGGGAGGAAGAGGTGTCAAATTTAATAAGATATATTTCTCTAAACACTGATTCTACTATTAACCTCACTCATGAATTTTTATCTATGTCATATAATATAGTTTCTATGTCAGCTTTCGGTGATAAATGCAAAGAGCAAGAAACATATATTATGTTCATTAAGGAACTTTTAAAGGTGGCTGAGAGTTTTAGTGTCACTAATTTGTTTCCCTCACAACATTGGCTACATGTGATTAGTGGAATGGAGCATAAATTGAAGAAATATCATAGAACCGGTGATATGATTCTtgaaaaaatcatcaacaaagcAAAAACAAAGATTGGTGGAGATGGAAGTCTTTTGTCCTATCTTTTGAGTCTCAATGATCAAGCATCTTCTAACCCTGATGGATTTCATTTGACTATCAACAACATTAAAGCCATTATTCAGGATATTACTATTACTGGAACTGATACATCAGCTACAACTTTGGAATGGGCTTTCTCTGAAATGTTGAAAAATCCAAGAGTACTAAAAAAAGCTCAGACAGAAGTTAGACAAGTTTTTGAAAGCAGAGGATATATTGATGAAATGGATCTTAAAGAACTAAAATTTCTAAAAGCAGTGATTAAAGAAACCTTACGGTTTCACCCTCCTGGCCCCCTATTACTTCCGAGAGAGTGCATTAAAACGTGTGAGATTAGTGGATACACAATACCAGTCGGAGCACAAGTGTTTTTGAATGCATGGGCAATTGGAAGAGACCAAAAATATTGGAATGAAGGAGAAAAGTTTTATCCTGAGAGGTTCGTGGATTGTTCAATTGACTACAGAGGATCTGATTTTGAGTTCTTACCTTTTGGTGCTGGAAGGAGAATATGTCCCGGCATCTTGTTTTCTGAACCTAATATAGAATTTCCTCTTGCACAATTGTTATACTATTTTGATTGGAAACTTCCCTATGGAACTAGTCATGAAAGTTTTGATATGATCGAATCCTTTGGGGCTACGGTGAAAAGAAAAGGTGAACTATTTGTAATTCCAATTCCTTACGATCATGTAGCTCTTGAATGA 1506 0.3433 METNFLWFSIFLSLIILILSVAKRIKSSDKITSNLPPGPWMLPIFGSIHHLIGSLPHHRMRELSQKYGPIMHLQLGETTTIIISSKEIAKEVLKINDVSFAQRPRLLGSEIITYGCTNIAFAPYGDYWRQLRKICTLELLSAKRVKSFQSIREEEVSNLIRYISLNTDSTINLTHEFLSMSYNIVSMSAFGDKCKEQETYIMFIKELLKVAESFSVTNLFPSQHWLHVISGMEHKLKKYHRTGDMILEKIINKAKTKIGGDGSLLSYLLSLNDQASSNPDGFHLTINNIKAIIQDITITGTDTSATTLEWAFSEMLKNPRVLKKAQTEVRQVFESRGYIDEMDLKELKFLKAVIKETLRFHPPGPLLLPRECIKTCEISGYTIPVGAQVFLNAWAIGRDQKYWNEGEKFYPERFVDCSIDYRGSDFEFLPFGAGRRICPGILFSEPNIEFPLAQLLYYFDWKLPYGTSHESFDMIESFGATVKRKGELFVIPIPYDHVALE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04234 501 Gene3D Cytochrome P450 28 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PANTHER CYTOCHROME P450 71B11-RELATED 13 495 - -
Tsu08g04234 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Tsu08g04234 501 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 Pfam Cytochrome P450 36 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 SUPERFAMILY Cytochrome P450 36 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g04234 501 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04234 Tsu-Chr8 60403457 60405288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04234 6 492 Cytochrome P450 AT3G26310 39.798 1.92e-128 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04234 - K23807 gmx:100779851 550.051