Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04217 ATGTATTCCCGGAACCAGAATCGGCCACCGCGAAGTCCCTCCAATATGCAGAGAAAAATCGGTGAAGAAAATCCTTCAGATAAGCGTAGAAGGATTGGTAGTGAAAGAATGGTCGGACAAGGTAGAGGTAGGGCTCCACTCGGtgcaataaacaacaaatcaGAAGCTAATGATGGTGGTACTGGTGCTGCTGAGGGATCCGAACCCAGCATCGTTGATTTCACTAAAGAGGAAGTAGATGCTTTGTTGAATGAGAGGATGAAGAAGGAGGCTCGAATAGATACTAAGAAAAAAATGGAGCAAATGGGGGATCTTATTAAGAGACTTAAAAACTGTATTAGATGGTTTAAGAGAGTTGAAGAAGGGTATgttaaagaaaaggaaaagctTCAGACAGATCTAGATTCTGCCGAGAAGAAATGTGTTGATATTGAGAATGAGATGAAAATTAAGATAGCAGAATTGAATGAGGCTATATCGAATTTGAGAATGACGATTTCCTCTTTAGAAGAGAAGATTGCAAAGGAAGAATCAGATAAATTGGAAGCTGTTGAATgttatagaaaagaaaaagaagccaGAAATGAAGCTGAGCAGATGAATGTTTCGCTTACAACTGAACTTGAGAAAGTTTCCAATGCGAAATTAGCTGCGGAGCAGAAGGTCATTGCAAACGAGAACCTGAACGAGAGATTGCAAGAGTATAATAATAGTTTGTTCCAGTGCAACAATCGCCTTCAGTCAAATCTTGAAACAATTAATAAAGAACATAAACAACTGGAAACAGAGAAGTCAAGTATTGTTGAAAACCTTAGCTATGTAAGAGGCCACAATAAGGCATTGCAAGAGCAGTTGGCATCTCTTAAAGCTTCACAGGATGAAGCTACAAAGGCGAAAGACATCTTAGCTATTGAACTCAAATGCCTCCGAGATGAGCTAAAACAAATTAGAGACGACCGTGACCGCCAACTGGGACAAGTTCAATCTTTAACTGGAGAAGTAGcaaaatataaagaatataCAGGGAAATCAAGTGAACAATTGGGTACATTGACGGCTaaaacaagtgctcttgaggaGGTATGTACTTCACAAAGACAACAAATAGACATGTTGCAGCAGCAATTGAGTGCtgaaaaggaaaaattaaagATCGCTGATTTATCTCATTCAGAAACAAGAACAGTGTTTGAAGACCAGAAAAGAATTATAGGTCAGCTACGAGAGAGACTGgaagaaaaagaacaacaaGTAATTGAAGGAGAATCGTTACGGAAAAAACTGCACAACACCATTCTCgAACTAAAAGGAAATATCCGTGTTTTCTGTCGTGTCCGACCTTTGCTACCTGATGATGGTCCTGCAACAGATATGGTTGTTTCATTCCCTTCATCAACAGAAGCTCTGGGCCGGGGTGTTGAATTAACACAGAGTGGGCAGAAGTACTCTTTTACATTTGACAAAGTATTTAATCACAAGGATTCACAGGAGGATGTTTTCACAGAGATTTCTCAGCTGGTACAAAGTGCACTTGATGGGTACAAGGTTTGCATTTTTGCTTATGGACAAACAGGTTCTGGAAAAACCTATACGATGATTGGCAGGCCAGGTCCACCTGAGCTGAAAGGATTGATCCCTCGTTCACTTGAACAGATCTTCCTGGTTAGTCAGGCACTGAAAGATCAAGGGTGGAAGTTTACAATGCAGGCCTCAGTACTTGAAATATATAACGAGACCATAAGGGATCTGTTATCACCAACAGAAAATCCTGGAAAGAAGTACACTATTGTACATGATGCTAATGGAAAAAACACATATGTTCCAGAGCTGACTATTGTAGATGTTTGCGGCGCAGATGAGATTTCCACCCTCCTACAAAAGGCTGCACAAAGCagGTCAGTAGGCAGGACGCAGATGAATGAACAATCGTCGCGCAGtcactttgtctttactctgcGAATAAGTGGCGTAAATGAGAACACCGAGCAACAGGTACAAGGCGTGTTAAACCTGATTGATCTTGCTGGGAGTGAAAGACTGTCAAAAAGTGGAGCAACTGGGGACCGTCTGAATGAAACTAAGGCGATAAACAAAAGCCTTTCCTGTTTGAGTGATGTCATTTTTGCCTTGGCAAAGAAAGAGGATCATGTCCCCTTTAGGAATTCTAAACTGACGACCCTTCTCCAGCCCTGCCTTGGTGGAGATTCCAAAACATTAATGTTTGTAAATATTTCTCCCGACCCAACTTCAACAGGAGAGTCGTTGTGCTCTTTGCGTTTTGCTGCGAGAGTGAATAGTTGTGAGATAGGCATTCCACGGCGCCAGACATCTACAAAGTTATCTGATCCTCGTTTGAGCTATGGCTAA 2367 0.3921 MYSRNQNRPPRSPSNMQRKIGEENPSDKRRRIGSERMVGQGRGRAPLGAINNKSEANDGGTGAAEGSEPSIVDFTKEEVDALLNERMKKEARIDTKKKMEQMGDLIKRLKNCIRWFKRVEEGYVKEKEKLQTDLDSAEKKCVDIENEMKIKIAELNEAISNLRMTISSLEEKIAKEESDKLEAVECYRKEKEARNEAEQMNVSLTTELEKVSNAKLAAEQKVIANENLNERLQEYNNSLFQCNNRLQSNLETINKEHKQLETEKSSIVENLSYVRGHNKALQEQLASLKASQDEATKAKDILAIELKCLRDELKQIRDDRDRQLGQVQSLTGEVAKYKEYTGKSSEQLGTLTAKTSALEEVCTSQRQQIDMLQQQLSAEKEKLKIADLSHSETRTVFEDQKRIIGQLRERLEEKEQQVIEGESLRKKLHNTILELKGNIRVFCRVRPLLPDDGPATDMVVSFPSSTEALGRGVELTQSGQKYSFTFDKVFNHKDSQEDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMIGRPGPPELKGLIPRSLEQIFLVSQALKDQGWKFTMQASVLEIYNETIRDLLSPTENPGKKYTIVHDANGKNTYVPELTIVDVCGADEISTLLQKAAQSRSVGRTQMNEQSSRSHFVFTLRISGVNENTEQQVQGVLNLIDLAGSERLSKSGATGDRLNETKAINKSLSCLSDVIFALAKKEDHVPFRNSKLTTLLQPCLGGDSKTLMFVNISPDPTSTGESLCSLRFAARVNSCEIGIPRRQTSTKLSDPRLSYG 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04217 788 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 788 - -
Tsu08g04217 788 Coils Coil 218 270 - -
Tsu08g04217 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 766 IPR027417 -
Tsu08g04217 788 MobiDBLite consensus disorder prediction 1 20 - -
Tsu08g04217 788 SMART kinesin_4 436 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g04217 788 MobiDBLite consensus disorder prediction 1 69 - -
Tsu08g04217 788 Coils Coil 72 92 - -
Tsu08g04217 788 PRINTS Kinesin heavy chain signature 513 534 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g04217 788 PRINTS Kinesin heavy chain signature 717 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g04217 788 PRINTS Kinesin heavy chain signature 637 654 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g04217 788 PRINTS Kinesin heavy chain signature 668 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g04217 788 Coils Coil 362 382 - -
Tsu08g04217 788 Coils Coil 397 424 - -
Tsu08g04217 788 ProSiteProfiles Kinesin motor domain profile. 438 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g04217 788 Coils Coil 187 214 - -
Tsu08g04217 788 Gene3D Kinesin motor domain 382 769 IPR036961 -
Tsu08g04217 788 Pfam Kinesin motor domain 444 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu08g04217 788 ProSitePatterns Kinesin motor domain signature. 667 678 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu08g04217 788 PANTHER KINESIN-LIKE PROTEIN 3 788 - -
Tsu08g04217 788 Coils Coil 120 179 - -
Tsu08g04217 788 MobiDBLite consensus disorder prediction 21 37 - -
Tsu08g04217 788 CDD KISc_C_terminal 436 769 - -
Tsu08g04217 788 Coils Coil 278 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04217 Tsu-Chr8 60300952 60307205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04217 414 779 Calmodulin-binding Proteins AT5G65930 39.837 3.94e-77 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04217 K10405 - gmx:100818473 1139.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01751 02 15615154 15620656 Tsu08g04217 08 60300952 60307205 PCT