Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04216 ATGGCACCAAAGAAACGCCTCCCTTCTCCTTCTCTCGAAGATGACAAAAAACCTTCAACCCAAAAGCAGCCAGAAGACGAAGTAGCatccgaagaagaagaagaagaagacgatGATTCatccgaagaagaagaagaaggttcTTCATCATCAGAAGAAGAAGCCGAAAAAGATCAACCTAAACCTTCCTCCAAATCCGCATCTGAATCCGAATCTGGATCAGGATCAGATTCTGGATCCGGCTCCGGATCCGATACCGAGTCCGAATCTGATTCCAAACCGGAACAAACTCCACCTCCTAACACCAAAGTTAAACCACTCGCTTCCAAGCCCATGAAGGCCCAACCAAAGGCCCAGGCCCAAACAACTTCTGCACCAGCCAGATCTGGAACTAAACGTGCGGCTGAAAACGAAAATGATTCAAATCGTTCGAAGAAGAAAACAACCGACTCTACTCCCGCCGGTGGTGGTTCCGACGAAGATAATGAGACTGAGGAAGACGTGAAATTGACTGGAGAAGACTCAAAGAAAAGTACTCAGAGAATTTTCAACGAAGAAGACGAGCTTGTTATTCTCAAAGGACTCGCTGATTTCATTTCCAAAACTGATAAAGATCCGTTGAAGGATGCTATCGCATTTCATAGTTTTGTTAAGAAATCGCTTGGTGCTGAAGCTAACAGTCAACAATTGAAGAGAAAGGTTCGTACTTTGAAGAAGAAGTTTGAAACCAGTGACAGTTTCACTAAACCTCATGATAAGAAAGCTTTTGAGCTTTTCAAGAAGGTTTGGGGTAATAATGGTGTTAATGAAGCTGAAGAAAATGGAAAAGTTAATGGGAAAATTGCGAAAGGTGTTAAGAAGGAAGCTAGTGGTTCTGTTAAGAAAGAATTAGCTATAGTTACTAAGAAGGAAACTTTGAAAGCTGAACTCGATGTTGATAATAGTTTGATTTCGAGGGAATTGTTTCGTTTTGGTGGTGATAGTTTGTCTGTTTCGACTAAGGATGGTATGATAGAGGGATTGGAATTGATCGCTGAATCGAAGAGGGTTGAATTTGAGGAAAAATGGAAGCAGGTGAAAATTGCTGAAATGGAGTTGTTTGTGAAAGGTTCAGAGTTGGTTAGGGATCAAAGTAACTTGATATTGCAGGCACTCGAGAAATCAAGCAAGTAG 1173 0.399 MAPKKRLPSPSLEDDKKPSTQKQPEDEVASEEEEEEDDDSSEEEEEGSSSSEEEAEKDQPKPSSKSASESESGSGSDSGSGSGSDTESESDSKPEQTPPPNTKVKPLASKPMKAQPKAQAQTTSAPARSGTKRAAENENDSNRSKKKTTDSTPAGGGSDEDNETEEDVKLTGEDSKKSTQRIFNEEDELVILKGLADFISKTDKDPLKDAIAFHSFVKKSLGAEANSQQLKRKVRTLKKKFETSDSFTKPHDKKAFELFKKVWGNNGVNEAEENGKVNGKIAKGVKKEASGSVKKELAIVTKKETLKAELDVDNSLISRELFRFGGDSLSVSTKDGMIEGLELIAESKRVEFEEKWKQVKIAEMELFVKGSELVRDQSNLILQALEKSSK 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04216 390 MobiDBLite consensus disorder prediction 133 147 - -
Tsu08g04216 390 MobiDBLite consensus disorder prediction 1 184 - -
Tsu08g04216 390 PANTHER BNAANNG10740D PROTEIN-RELATED 22 387 IPR007592 GO:0006355
Tsu08g04216 390 PANTHER STOREKEEPER PROTEIN 22 387 - -
Tsu08g04216 390 MobiDBLite consensus disorder prediction 27 52 - -
Tsu08g04216 390 MobiDBLite consensus disorder prediction 8 26 - -
Tsu08g04216 390 MobiDBLite consensus disorder prediction 65 98 - -
Tsu08g04216 390 Pfam Protein of unknown function, DUF573 180 264 IPR007592 GO:0006355
Tsu08g04216 390 MobiDBLite consensus disorder prediction 115 130 - -
Tsu08g04216 390 MobiDBLite consensus disorder prediction 169 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04216 Tsu-Chr8 60291832 60293247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04216 80 384 GeBP Transcription Factor Family AT1G61730 33.436 5.68e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tsu08g04216 DUF573 6.9e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04216 - - mtr:MTR_2g010790 358.992