Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04195 ATGAAAgtaataattgttgtttttgtttatgtttatgtttgtcTATCATTCTTTCATAAAATAACATATGCAGCTGATACCTTGACTCAAAATTCTTCAATTACATATGGCCAAGAACTCATTTCTGCTAGACAAATTTTTTCTCTTGGTTTCTTTAGTCCAGGAAGCTCAAATAAATACTACTTAGGGATATGGTACAAGAATATTACACCTCAAACAGTTGTTTGGGTTGCAAACAGAGAAAAACCACTTAATAACTTAAGTGGAAACCTAACCATTGGTGTTGATGGGAATATTGTACTTGTTGATGGAGTAGGTAACAAGTTATGGTATACAAATTCATCAAGAACAATTCAAAAGCCACTTGTAAAGTTGTTAGATTCTGGTAACTTGGTCTTGATGGATGAAGAGACTTACATATGGCAAAGCTTTGATTATCCAACAGACACAATGTTACCTGGCATGAAGTTGGGTTGGGATAAGATCTCAGGGATTGATAGATATTTGACGTCGTGGAAGAGTGATGATGATGACCCTTCTTATGGAAGTTTTACTTATAACTTTGATTACAAAGAGTTTCCGGAGTTGGTGATTCGTCAAGGAAAGAATATCACATTCAGAAGTGGGATTTGGAATGGTGTTCGTTTTAATTCTGATGATTGGATATCGTTTAAAGGAGTTACGGCTTTCAAGCCACAACTTTCGGTAACAAACAATGAGGTAGTGTATTGGGATGAACCTGGAGATAGATTGTCGAGGTTTACGATGAGGGATGATGGATTGTTGGAAAGATATATATGGgacaataaaattgttaaatGGACTAAAATGTATGAGGCAAGAAAAGATTTTTGTGATTATTATGGAGCATGTGGGACAAATGGTGTTTGTAATATCGATGATGTTCCTGTCTATTGTGACTGTTTGAAAGGCTTCAAACCTCGATCACAAGACGAATGGGATTTTTTAAATCGTTCCGGTGGGTGTATCAGGAAAATACCTTTGAATTGCACACAAGCTGACAGGTTTCAGAAATTAAGCAGGGTGAAATTGCCTATGTTGTTGCAGTTCTGGACAAATAGTACCATGAGTCTTGAAGAATGCAAGGTCGAGTGCTTGAAGAATTGTTCTTGCACTGCATATGCAAATTCCGTCATAAATGAAGGGCCTCATGGTTGCTTGATTTGGTTTGGTGACCTGATTGATATTAGGTTGCTTATAAATGAAGATAGTTCACAACTTGAGCTTTATGTAAGGTTAGCTGCTTCAGAAATAGGTTCCACCACTAGTGCTAGTAAAAGGAGAAAGATAGCATTGATTATTTCAGCATCCATGGCAGTGTTTGTTTTGTGTATCCTTTTCTACCTTTGCAAGAAGTACGCTACGATAAGAAAACGGAAGGCCACTGCTGATTTCGCAGGAAAGAGAAACCATAATGAAGAACAAGCGTCGCCTCTTTTTGATATAGATATAATTCTAGCTGCTACAAACAGTTTTTCTATTGAGAACAAGATTGGAGAAGGAGGTTTCGGTCCAGTGTATAAGGGTATATTGGCTCAAGGACAAGAAATAGCTGTGAAAAGGCTATCAAAAACTTCAAAACAAGGAGTCACAGAGTTCATGAATGAAGTTGGATTGGTCGCTAAGCTACAACACCGCAATCTTGTCAGTGTTTTGGGAGGGTGTACTTATGGAAATGAAAGAATGTTGGTCTATGAATACATGCCTAATGGTAGTTTGAACCACTTCATTTTTGATCCTACACAAGGGAAATTTTTGCAGTGGAGGAAACGATATGATATTATTACGGGAGTTGCTCGAGGACTACTTTATCTTCATCAAGATTCAAAACTAACTATCATTCATAGGGATCTGAAAACTAGTAATATTCTACTTGACAGTGAAATGAACCCCAAGATTTCTGATTTTGGTGTGTCACACATCTTGGAAGGAAATAGTTCAGCTGTAACAACGAATAAAATTGTCGGGACAGTTGGTTATATGTCTCCTGAGTATGCGGTAAACGGTCTCCTTTCCCTCAAGTCTGATGTATTTAGCTTTGGAGTTATAGTGTTAGAGATATTAAGTGGCACGAGAAATAATCACTTCAAGAATCAAGATCATCCCCATAATCTCTTGGGACAGGCATGGATATTATGGAAAGAAGGTCGAGCGTTGGAATTCATGGATGCGAATATGGACCTTACTAGCATACCATATGAAATACTAAGGTGCCTACAAATTGGTCTCTTGTGTGTTCAAAAGTTTCCTGAAGATAGACCAGATATGTCTTCTGTGGTTTTTATGTTGGGCAATGAAAGTATTGCACTTGCACAACCAAACAAGCCTGGATTCTTTTCAGATGAGATAGAGTTTCATGATTATAGTGAGAAGGACTCTTTTAGCAACAATGCTATGACTATTACCCTATTGGAAGCGCGAAATTAG 2448 0.3693 MKVIIVVFVYVYVCLSFFHKITYAADTLTQNSSITYGQELISARQIFSLGFFSPGSSNKYYLGIWYKNITPQTVVWVANREKPLNNLSGNLTIGVDGNIVLVDGVGNKLWYTNSSRTIQKPLVKLLDSGNLVLMDEETYIWQSFDYPTDTMLPGMKLGWDKISGIDRYLTSWKSDDDDPSYGSFTYNFDYKEFPELVIRQGKNITFRSGIWNGVRFNSDDWISFKGVTAFKPQLSVTNNEVVYWDEPGDRLSRFTMRDDGLLERYIWDNKIVKWTKMYEARKDFCDYYGACGTNGVCNIDDVPVYCDCLKGFKPRSQDEWDFLNRSGGCIRKIPLNCTQADRFQKLSRVKLPMLLQFWTNSTMSLEECKVECLKNCSCTAYANSVINEGPHGCLIWFGDLIDIRLLINEDSSQLELYVRLAASEIGSTTSASKRRKIALIISASMAVFVLCILFYLCKKYATIRKRKATADFAGKRNHNEEQASPLFDIDIILAATNSFSIENKIGEGGFGPVYKGILAQGQEIAVKRLSKTSKQGVTEFMNEVGLVAKLQHRNLVSVLGGCTYGNERMLVYEYMPNGSLNHFIFDPTQGKFLQWRKRYDIITGVARGLLYLHQDSKLTIIHRDLKTSNILLDSEMNPKISDFGVSHILEGNSSAVTTNKIVGTVGYMSPEYAVNGLLSLKSDVFSFGVIVLEILSGTRNNHFKNQDHPHNLLGQAWILWKEGRALEFMDANMDLTSIPYEILRCLQIGLLCVQKFPEDRPDMSSVVFMLGNESIALAQPNKPGFFSDEIEFHDYSEKDSFSNNAMTITLLEARN 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04195 815 Gene3D - 19 144 IPR036426 -
Tsu08g04195 815 CDD B_lectin 31 147 IPR001480 -
Tsu08g04195 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Tsu08g04195 815 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Tsu08g04195 815 Pfam D-mannose binding lectin 73 173 IPR001480 -
Tsu08g04195 815 Gene3D Transferase(Phosphotransferase) domain 1 575 781 - -
Tsu08g04195 815 Gene3D Phosphorylase Kinase; domain 1 459 574 - -
Tsu08g04195 815 SMART ntp_6 338 420 IPR003609 -
Tsu08g04195 815 SUPERFAMILY Protein kinase-like (PK-like) 483 770 IPR011009 -
Tsu08g04195 815 PIRSF SRK 1 814 IPR024171 GO:0004674
Tsu08g04195 815 ProSiteProfiles PAN/Apple domain profile. 337 421 IPR003609 -
Tsu08g04195 815 CDD PAN_AP_plant 334 421 - -
Tsu08g04195 815 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 811 - -
Tsu08g04195 815 CDD STKc_IRAK 505 770 - -
Tsu08g04195 815 ProSiteProfiles Protein kinase domain profile. 499 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g04195 815 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 10 811 - -
Tsu08g04195 815 SMART blect_4 31 147 IPR001480 -
Tsu08g04195 815 SMART serkin_6 499 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g04195 815 Pfam PAN-like domain 337 403 IPR003609 -
Tsu08g04195 815 Pfam Protein tyrosine and serine/threonine kinase 500 768 IPR001245 GO:0004672|GO:0006468
Tsu08g04195 815 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Tsu08g04195 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 177 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04195 Tsu-Chr8 60162666 60165716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04195 419 787 Receptor kinase-like Gene Family AT4G38830 51.467 3.62e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu08g04195 PK_Tyr_Ser-Thr 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04195 - - gmx:102669607 1286.55