Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04192 ATGCAAGGTTTCTTTCTCTTGTTCTTGTTCATCACTTCACTTTCTATTCTCATCACAATCTCAACCTCTACAGATACCTTAACCTCATCACAAATTCTCACAACAAACCAAACCCTTGAATCATCTCATGGAACATTCGTTCTTGGTTTCAACCCCGGAACAAATTCAAACATTTATTTAGCCATATGGTACAAAAACATCAACCCAAGAACAGTTGTTTGGGTTGCAAACAGAGACAATCATCTTCAAAATAATTCAACCAATAGTGGCTTTCTCAAAATTGGTGACAATGGAAACATAGTACTTCtcaattcatcatcaaacaACAACCTCGTATGGTCTTCGAATCAAACAACAGTTACTAAAAACCAACTTGTTCTTCAGCTCTTGGATAACGGAAATTTAGTTCTAAGAGGAAAAAATGTGAATGACCCGACAAAATATATATGGCAAAGCTTCGATTACCCGACAGATACTTTGTTACCATCCATGAGCATCGGTTGGAACTTCGACAAAAACACGGAAAAACACTTAACTTCATGGAAGATCACACGTGAAGACCCTTCAACGGGAGACTATTcatacaaaattgattttcatgGTTTACCAGAAATTTACCTACGGAATGATGAAAATATTACATATCGAAGTGGACCTTGGGATGTTGGCATATCCGGAAGTTTGATGTTCTCATCGGACAAACATGGCATATACTACCTTTCATACGAAATTCCATCAACTTTTTCCCGACTGGTTGTGACTTCGGATGGTGTACTTCAATATCttatttataatcaaaatactaaaaattGGGTAAAATATGGGTTAGCACCGAAAGATCAATGTGATAGTTACAAAGCCTATGGTCCTTATTCTGTTTGTGACACTAATCCTTCCCCTGTTTGTCAATGTGTGGAAGGTTTCAGTCCTAAGAATAAACAAGATTGGAAATTGAGAGATGGGTGTACGACAAATTTGGATTGTGAGAGTGATgagttttatcaaatggagaaTGTGAAGTTGCCTGAGACAACCTCTGTGTTTGTTAACAACACAATGGAGATTAAAGAATGTGGTAATTTGTGTTTTAGGAATTGTTCTTGTACGGCTTATTCTATTGTTGATGCAACTTATAGCGGTGGTTGTGTTATGTGGTTTGGTGAACTTGTTGATATCAGAAAGTATACTGCAGAGGGACAAAATCTTCACATACGCCGTGCTTATCAAAAACTTGATACAAATGGGAAAAAAAATGGTACTCAAATCACCATAGCTACAGTGATAGTGGCAACAATTATTATTTCTGCTTGTACCTATTTCTTATGGTCATGGGCTTCTAAACGTTCATCCGGTTCAGGGCAAACCCCTCAAGAAAACCAAAGTGCAAATCTAATTAGAGATGCGAAACAAGTTAAAATAGAAGACCTTCCTTTATTTGAGTTCAAAAACATATCTACTGCAACAAATAGCTTTAGTTCAGCTAATAAGATTGGACAAGGTGGTTTTGGTTCAGTGTACAAGGGAGAATTGCCAGATGGATTAGAAATAGCGGTGAAAAGACTTTCAAAAACATCAGGACAAGGTCtagaagaatttatgaatgaagtGATTGTGATTTCAAAGCTTCAACATCGCAATCTTGTAAGACTTTTAGGCTGCTGCATTGAAGGGGAAGAAAAGATGTTGGTCTATGAGTATATGCCTAACAACAGTTTAGATTTTTATCTATTTGACCCAATAAAAAAGAAGGTTTTAGATTGGCAAAAACGTTTATacgtaattgaaggaatctctCGAGGCCTGCTTTATCTTCATAGAGATTCGAGATTAAGAATAATACATAGAGACCTAAAGCCAAGTAACATTTTGTTGGATGGAGAATTGAATCCAAAAATATCTGACTTTGGCATGGCCAGAATCTTTGGAGGTACCGAAAACGAGGGCAATACAAGAAGAATTGTGGGAACCTACGGATACATGTCTCCAGAATATGCAATGGAAGGATTGTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGAGTTTTGCTCCTCGAGATAATAAGTGGTAGGAAAAACACAAGTTTCTATAATCATGAGCAAGCACTCAGTCTCTTAGGATATgcaTGGAAACTATGGAATGAAGAGGAGGTTGTATCTTTGATAGATCCAGAAATATGCAATCCAGATAATGTAGATCACATTTTGAGATGCATACATATTGGACTTCTGTGTGTTCAAGAAATTGCAAAGGAGAGGCCTACTATGGCCACAGTTGTTTCAATGCTTAGTAGTGAGATTGTTAAATTTCCTAGCCCATGTCAACCAGCATTCATTCAAAGACAGATTGAGCATAGAGGAGATTTACCTGAACAGAGTGAAAACTTGAATTCCACGAACAGTGTCACTATCACAGGCTTGCAAGGCCGATAA 2430 0.3568 MQGFFLLFLFITSLSILITISTSTDTLTSSQILTTNQTLESSHGTFVLGFNPGTNSNIYLAIWYKNINPRTVVWVANRDNHLQNNSTNSGFLKIGDNGNIVLLNSSSNNNLVWSSNQTTVTKNQLVLQLLDNGNLVLRGKNVNDPTKYIWQSFDYPTDTLLPSMSIGWNFDKNTEKHLTSWKITREDPSTGDYSYKIDFHGLPEIYLRNDENITYRSGPWDVGISGSLMFSSDKHGIYYLSYEIPSTFSRLVVTSDGVLQYLIYNQNTKNWVKYGLAPKDQCDSYKAYGPYSVCDTNPSPVCQCVEGFSPKNKQDWKLRDGCTTNLDCESDEFYQMENVKLPETTSVFVNNTMEIKECGNLCFRNCSCTAYSIVDATYSGGCVMWFGELVDIRKYTAEGQNLHIRRAYQKLDTNGKKNGTQITIATVIVATIIISACTYFLWSWASKRSSGSGQTPQENQSANLIRDAKQVKIEDLPLFEFKNISTATNSFSSANKIGQGGFGSVYKGELPDGLEIAVKRLSKTSGQGLEEFMNEVIVISKLQHRNLVRLLGCCIEGEEKMLVYEYMPNNSLDFYLFDPIKKKVLDWQKRLYVIEGISRGLLYLHRDSRLRIIHRDLKPSNILLDGELNPKISDFGMARIFGGTENEGNTRRIVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRKNTSFYNHEQALSLLGYAWKLWNEEEVVSLIDPEICNPDNVDHILRCIHIGLLCVQEIAKERPTMATVVSMLSSEIVKFPSPCQPAFIQRQIEHRGDLPEQSENLNSTNSVTITGLQGR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04192 809 CDD PAN_AP_plant 324 405 - -
Tsu08g04192 809 ProSiteProfiles Protein kinase domain profile. 491 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g04192 809 MobiDBLite consensus disorder prediction 788 809 - -
Tsu08g04192 809 Pfam S-locus glycoprotein domain 229 312 IPR000858 GO:0048544
Tsu08g04192 809 CDD STKc_IRAK 497 762 - -
Tsu08g04192 809 SMART serkin_6 491 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g04192 809 PIRSF SRK 1 809 IPR024171 GO:0004674
Tsu08g04192 809 Pfam D-mannose binding lectin 71 182 IPR001480 -
Tsu08g04192 809 SMART ntp_6 328 406 IPR003609 -
Tsu08g04192 809 Gene3D Phosphorylase Kinase; domain 1 452 566 - -
Tsu08g04192 809 SUPERFAMILY Protein kinase-like (PK-like) 477 792 IPR011009 -
Tsu08g04192 809 Pfam Protein tyrosine and serine/threonine kinase 494 762 IPR001245 GO:0004672|GO:0006468
Tsu08g04192 809 MobiDBLite consensus disorder prediction 791 809 - -
Tsu08g04192 809 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Tsu08g04192 809 CDD B_lectin 31 156 IPR001480 -
Tsu08g04192 809 Gene3D - 18 153 IPR036426 -
Tsu08g04192 809 SMART blect_4 30 156 IPR001480 -
Tsu08g04192 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 220 IPR036426 -
Tsu08g04192 809 Pfam PAN-like domain 328 392 IPR003609 -
Tsu08g04192 809 PANTHER - 14 807 - -
Tsu08g04192 809 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Tsu08g04192 809 ProSiteProfiles PAN/Apple domain profile. 328 408 IPR003609 -
Tsu08g04192 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Tsu08g04192 809 Gene3D Transferase(Phosphotransferase) domain 1 567 769 - -
Tsu08g04192 809 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04192 Tsu-Chr8 60123721 60135815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04192 424 777 Receptor kinase-like Gene Family AT4G23230 55.367 2.90e-128 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu08g04192 PK_Tyr_Ser-Thr 9.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04192 - - gmx:100802437 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g04192 08 60123721 60135815 Tsu02g01783 02 15980196 15984003 PCT