Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04180 ATGGAAAACACAACAATGTTAGCACCTTCCAATATTTCAGACATCACAATAATTTGCTATACACCAACCATGACAACAACAAATGGTGTATGGCAAGGTGATAACCCTTTAGATTATTCTATTCCTCTCTTTGTTTTACAAATAACCTTAGTTGTTCTTGCCACacgtttctttgtttttatcctCAAACCCTTACATCAACCTCGTGTCATTGCTGAAATCCTGGGTGGATTGCTATTGGGACCATCAGTGCTTGGAAGAAATGAACAATTAGCAAATATGATATTTCCTCTAAAAAGTGCAATGTTTTTAGAAACAATGGCAAACATAGGCCTGATATACTTTCTGTTCCTAATTGGTTTAGAGATGGACATGTCTATTGTGAAACGAACTGGGACAAAGGCGGTGTCCATTGCCATTGCTGGTATGATTATGCCCTTAATTGTTGGTGTTGGAATCTCCTTTTCCTTGAGTGGTATAGAAGACAATACAAATGAAATTAGCTATATTCTCTATCTTGGTATTGTTCTATCTGTCACTTCCTTTCCTGTGCTTGCTCGAATGCTTGCCGGGCTCAAACTCATCAACACTGAGCTAGGACAGCTTGCCCTTTCAACTTCCCTCATCAATGATGTGTGTGCTTGGGTTTTACTAGCTCTAGCAATTGCTTTATCAGAGCAAAATTCAAGTACTTGGGCTTCTGTTTGGGTTATAGTgtcaaatattttctttgtagctttctgttttgttgttgttaggCCAGCAGTTAATTGGTTGATCAAGAAAACACCTGAAGGAAAATCGTTTAGCGATTTCCAAATATGCGTTGTACTTGTCGGTGTTATGATCTCAGCTTTCATTACAGATGTTATTGGAACACATGCTATTTTTGGTGCTTTTGTTTATGGATTAGTGATTCCAAATGGTCCACTTGGAGCTGCTATAATTGAAAAGCTAGAAGATGTTGTTTCAGGGATTTTACTCCCACTTTTTTATGCTATCAGTGGACTTAAGACTAATATTAACTTAATCCATGGAACTGGTTCATGGTCATTTGTATTCACAGTCATTCCTCTTGCTTGTTTTGGCAAGGTCTTCGGTACTCTCATTATTTCAGTCCTTTACGACACACCAATCCGTGATGGTATTGTTCTTGGTTTACTTATGAACACCAAAGGTCTTATTGAAATGATTGTGCTTAATATTGGGAGGGAACAAAAGGTCCTGGGTGATGAAATATTCTCAATCATGGTTGTTGCAACACTTATAATGACAGCAACAGTTTCACCTATTGCGGCATTAATCTATAAGCCAAGGAAAAGACTGATACCTTATAGAAAGAGAACAATACAAAATACAAGAATGGATGCAGAGTTAAGGGTGCTTCTTTGCATTCATGCCCCTAGAAATGTCCCTACAATAATCAATCTTCTAGAAGCAACATACCCAAACAAAAGCTCTCCAATAAGTGCTCATGTTGTCCATTTAGTTGAACTCACCAATCGAGCTTCAGCCATGCTTGTTGTGCATACCAGTAGACAATCACCGGGAGGCCCAGCACTGAACAAAACACAAGCACAAACCGAACACATCATCACCGCATTTAAGAGCTTCGAGGAACACGTTGGTTATGTCGCGGCTCAACCTTTGACAGTTGTTTCCCCTTACCCAACCATGCATGAAGACATATGCATTTTGGCAGAGGAAAAAAGGGTAGCCACCATCATCATTCCTTTCCATAAACAACAAACAGTTGACGGAGACATGCAAGAAACAAACCCTGCATTGAGAATGGTTAACCACAACTTATTACAAAGCTCACCTTGCTCGGTTGGGATACTTGTCGATAGAGGCCTTAACGGATCCAACCGGTTAACTGCAAACCAAGCATCTCACCGGGTTGCTGTGTTATTCTTCGGTGGACCGGATGATAGGGAAGCATTATCCTATGGATGGAGAATGTCAAGGCATCCGAGAGTTTTTCTCACTGTGATGCATTTCATTCCAAGTAAGGATATAACTGAATCGAACGATGATCAACTAGACGATGAAAGAAGTATAATTTCAAGCCAAATAGACGAGGAGTGTATAAGTGACATAAAGATGATAGCTGCAAGTGATGACTCAATTAACTACATAGAGAAAGTTGTGAGTAATGGAGAGGAAACAGTTACGGCGATAAGAGAAATGAACAATGTCAATGACTTGTTCATAGTTGGGAGAGGTCAAGAAAATGCTTCAGCATTAACCGACGGGTTGACAGACTGGAGCGAATGTCCCGAGTTAGGAGCCATTGGAGATTTGTTAGCTTCTTCAGATTTTGAAACAAGTGCTTCAGTTCTTGTGATGCATCAATATGTTGGACTAGGGCCAGAAGGAGAGGACATTCTTAGAAGCAACACAGATAGAGCTTCCATTGGGAATCCAGATCCTTTTGCTTGTCGAGtGAGCAACATTTCTTTAGTTGTTTCTCACATCTTTCGGGAGGATAACCATTGTCCTGACAAGCTTGCTAACTTAGAGCTTTTCGTATCTGATTGTATATGGTTAGATCAATGTCCTGCTTTGATTAGAGAGGAATTTGCTAAGAATGTGATTGATCAAAATGTAGCACTAAAGTTGAAGGGAAAATTTCAAGCAGAAGTAGTTTGTTTCGTTCTTGGACTCGGATCCCTTGTTGCGTGGAATAGTATGATGACAATCGGAGACTACTACTACAAACTGTTTCCTaCGTACCATCCTTCACGAGTACTCACCATAATTTATCTACCATTTTCACTTGTGACAATGGTAATATTGACACACAATGAGTCAAGGATCAACACTAGGATGAGAGTCATAACTGGATACACTATTTTCTTCGTCTGCACTTTGCTAGTTCTTGTTTTAGATCTAGCAATGTCGGGGAAAGGAGGAATCATACATTATATTGGTTTATGTGCACTGTCTGCTAGCTTTGGAGTTGCAGATGCTCTTGTTCAGGGTGGCATGGTTGGAGACATGTCCTTTATGTGTCCTGAGTTCATTCAGTCCTTCTTAGCTGGTTTAGCGGCCTCAGGAGTTCTAACATCTGCTTTGAGATTTCTCACCAAAGTCGCATTTGAGAAATCGGATAATGGACTTCGAAAAGGGGCTTTACTATTCTTTGCAATTTCTACTTGCTTTGAGCTAGTGTGCATAATTCTCTATGCAAACTACTTTCCTAAGTTGTCCATTGTAAAATATTATCGCTCGAAGGCAGCCTCTGAAGGATCGAAGACCGTTTCAGCTGATTTAGCAGCTGCTGGCATTCAAAATGAGACAAACAATCAGGTTGGATTTGATGATAAACAACATGAACGACTGAGCAATAAGCAACTATTTCTTCAGAACATCGACTATGCTGCTGATCTATTTCTGATATACGTATTAACTTTGTCGATTGTGCCTGGATTCTTGTACGAAAATACTGGATCACACCAGCTAGGAAAATGGTACGCGCTGGTTTTGATCGCAGTGTTCAACGTCTCAGATCTAATATCAAGATATATTCCTTTCATCAAATTGTTGAAGTTGGAGTCAAGAAAGTGCTTACTCGCCGCAATTCTTTCAAGAGTACTACTGATTCCGGCATTTTACTTCACGGCAAAATATGCTGATCAAGGATGGATGATTTTGCTTGTTTCATTCTTAGGACTAACCAATGGATACCTTACTGTTTGTGTGCTCACAGTTGCACCAAAAGGCTACAAGGGTCCTGAACAGAATGCACTAGGTAATTTTCTTGTGCTGATTCTTGAGTGTGGCATATTTGTTGGAGATGCACTTGATTGGTTATGGCTCATAGGAAAATCACAAGGATTCTGa 3846 0.3939 MENTTMLAPSNISDITIICYTPTMTTTNGVWQGDNPLDYSIPLFVLQITLVVLATRFFVFILKPLHQPRVIAEILGGLLLGPSVLGRNEQLANMIFPLKSAMFLETMANIGLIYFLFLIGLEMDMSIVKRTGTKAVSIAIAGMIMPLIVGVGISFSLSGIEDNTNEISYILYLGIVLSVTSFPVLARMLAGLKLINTELGQLALSTSLINDVCAWVLLALAIALSEQNSSTWASVWVIVSNIFFVAFCFVVVRPAVNWLIKKTPEGKSFSDFQICVVLVGVMISAFITDVIGTHAIFGAFVYGLVIPNGPLGAAIIEKLEDVVSGILLPLFYAISGLKTNINLIHGTGSWSFVFTVIPLACFGKVFGTLIISVLYDTPIRDGIVLGLLMNTKGLIEMIVLNIGREQKVLGDEIFSIMVVATLIMTATVSPIAALIYKPRKRLIPYRKRTIQNTRMDAELRVLLCIHAPRNVPTIINLLEATYPNKSSPISAHVVHLVELTNRASAMLVVHTSRQSPGGPALNKTQAQTEHIITAFKSFEEHVGYVAAQPLTVVSPYPTMHEDICILAEEKRVATIIIPFHKQQTVDGDMQETNPALRMVNHNLLQSSPCSVGILVDRGLNGSNRLTANQASHRVAVLFFGGPDDREALSYGWRMSRHPRVFLTVMHFIPSKDITESNDDQLDDERSIISSQIDEECISDIKMIAASDDSINYIEKVVSNGEETVTAIREMNNVNDLFIVGRGQENASALTDGLTDWSECPELGAIGDLLASSDFETSASVLVMHQYVGLGPEGEDILRSNTDRASIGNPDPFACRVSNISLVVSHIFREDNHCPDKLANLELFVSDCIWLDQCPALIREEFAKNVIDQNVALKLKGKFQAEVVCFVLGLGSLVAWNSMMTIGDYYYKLFPTYHPSRVLTIIYLPFSLVTMVILTHNESRINTRMRVITGYTIFFVCTLLVLVLDLAMSGKGGIIHYIGLCALSASFGVADALVQGGMVGDMSFMCPEFIQSFLAGLAASGVLTSALRFLTKVAFEKSDNGLRKGALLFFAISTCFELVCIILYANYFPKLSIVKYYRSKAASEGSKTVSADLAAAGIQNETNNQVGFDDKQHERLSNKQLFLQNIDYAADLFLIYVLTLSIVPGFLYENTGSHQLGKWYALVLIAVFNVSDLISRYIPFIKLLKLESRKCLLAAILSRVLLIPAFYFTAKYADQGWMILLVSFLGLTNGYLTVCVLTVAPKGYKGPEQNALGNFLVLILECGIFVGDALDWLWLIGKSQGF 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04180 1281 PANTHER CATION/H + ANTIPORTER 12 797 - -
Tsu08g04180 1281 PANTHER CATION/H+ EXCHANGER 3 12 797 - -
Tsu08g04180 1281 Pfam Nucleoside transporter 986 1273 IPR002259 GO:0005337|GO:0016021|GO:1901642
Tsu08g04180 1281 Pfam Sodium/hydrogen exchanger family 50 431 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu08g04180 1281 Gene3D - 43 442 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04180 Tsu-Chr8 59972209 59979188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04180 13 796 Antiporter Super Family AT2G13620 61.965 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04180 - - gmx:100800514 1185.24