Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04163 ATGATGTTTAATcatgaatttttatttcttgttgttgAACAGGTTAGCGAAGAAGTGGAGCGCGCTTTAGCAAAATTAGGCCCTGCCAATTTTAGTGAGagATCTAAATCTTCTCCGAAGCGCATCGAAAGCCCGGATGGCGGAAATTTACAGTTACAATTTAGGACTAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGGGAGCAGGGCACTGCCATTCATATTGTCTTGATTGATGCAAACACAGGCCATGTTGTCACATCCGGCCCAGCGTCATGTGTCAAACTAGATGTTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATACTTGGAGTCAAGAAGAATTTGAGAGCCATGTTGTGAAAGAGCGAGAAGGAAAACGACCTCTTCTGACTGGTGGTGATCTGCAAGTCACACTGAAGGATGGTGTAGGGACACTGGCTGATCTTACATTTACAGACAACTCTAGCTGGATAAGAAGTCGGAAGTTCAGGCTGGGGTTAAAAGTTTCCTCGGGTTTTTGTGAGGGAATACGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAACACTATCCACCTGCCTTGACTGATGAGGTCTGGAGATTAGAGAAGATTGGAAAGGATGGATCCTTTCACAAAAGGCTAACTAAAGCAGGCATATGTTCCGTTGAAGATGTCCTTCAGCTTGTGGTTAGAGACCCACAGAGATTGCGGAATATTCTCGGGAGTGGCATGTCAAATAAAATGTGGGAGGTTCTAGTTGAACATGCAAAGACTTGTGTCCTCAGTGGAAAACTCTATGTATACTATCCTGATGATGCAAGGAATGTTGGTGTTGTTTTCAATAATATCTACGAGTTGAGTGGCTTAATCACCAATGACCAATATTACTCTGCTGATTCTCTCTCTGATAGTCAAAAGGTTTATGTGGACACATTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTGTTGAGTATGATGGTAAGTCTCTATTAAATTACAATCAGAATAGGACTTTGGGTACATCCCAGCATCAGGTTCCAGTGGGTTCCCACGATTATTCTGTTTCAAACTCACACGATCAGCAGATCTCTATCCCAAGTCTACCAGTTCATGTACCTACAGGACAACCTTCAATGGATCCAGGTGTAGCAGTTGGAGGTTATCACCATGCTACAACTACCAGATTCTCAATGCAACCACAGGATGCTGATCTTAATTCTGCTCTTCAGTTTGGTAATGCTGCATTCCCTCTACAAAATCTGTTGATGAGTGCTTCACACCAATCTCAACTACCAAGCAATGAAAATGAGTTGTCACTTGGTCCCCCACAATCAGCCACCCCTGGCTTTCAGACTGTTGGCCTTTCAGATCCTACTTATAGAGGATATGAAGACTTCTTCCCGGAAGAGGATATTCGTCTTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCACCTGCTCCGTATTTTTAATATGGGAGGGCAACCTCAGACTTCCTTTAATGCTCCCGAAGATGGATATCCTTATTCATCTGCTTACACGCCTGCAACCTCCATGAACTACAATGTAGATGATGAAAGAAACCGTTCCTCAGGAAAGGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAAGGCTGCTGAAAGACGGGCACAGCTTGTTGAGCTGGATGacccataa 1767 0.429 MMFNHEFLFLVVEQVSEEVERALAKLGPANFSERSKSSPKRIESPDGGNLQLQFRTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTSGPASCVKLDVIVLEGDFNNEDDDTWSQEEFESHVVKEREGKRPLLTGGDLQVTLKDGVGTLADLTFTDNSSWIRSRKFRLGLKVSSGFCEGIRIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLTKAGICSVEDVLQLVVRDPQRLRNILGSGMSNKMWEVLVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLITNDQYYSADSLSDSQKVYVDTLVKKAYENWMHVVEYDGKSLLNYNQNRTLGTSQHQVPVGSHDYSVSNSHDQQISIPSLPVHVPTGQPSMDPGVAVGGYHHATTTRFSMQPQDADLNSALQFGNAAFPLQNLLMSASHQSQLPSNENELSLGPPQSATPGFQTVGLSDPTYRGYEDFFPEEDIRLRSHEMLENEDMQHLLRIFNMGGQPQTSFNAPEDGYPYSSAYTPATSMNYNVDDERNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDP 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04163 588 MobiDBLite consensus disorder prediction 445 469 - -
Tsu08g04163 588 Pfam Calmodulin binding protein central domain 211 276 IPR046830 -
Tsu08g04163 588 PANTHER OS02G0177800 PROTEIN 14 586 IPR012416 GO:0005516
Tsu08g04163 588 PANTHER CALMODULIN-BINDING PROTEIN 14 586 - -
Tsu08g04163 588 Pfam Calmodulin binding protein C-terminal domain 281 343 IPR046829 -
Tsu08g04163 588 Pfam Calmodulin binding protein-like N-terminal domain 50 198 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04163 Tsu-Chr8 59789476 59795009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04163 15 583 Calmodulin-binding Proteins AT5G57580 60.272 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04163 - - gmx:100802994 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01816 02 16451334 16455737 Tsu08g04163 08 59789476 59795009 PCT