Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04153 ATGGAAACCGCCATGGCCATGAATTCCAAACCCTCATGTGAGATCATATTCTATACTCTAACCATGGTTTTAATTCTTTCTGGTATAATTTTCTTCTATATCATGACCTATGCTTCATCTAATGTCAAGTGCCAATTAACTGAGGCTTCTCTATCAAAGTTCAACCACATAAGGCACAATATCTCATATGAGTTCAACCACACAAGCTACAATGCAAGCTACGATACCTTACATTACAAATTAGAAGCAAAAATCACATCAAGAAATCCCAACAAGTACATCAAAGTGTACTATCCAAAGATCACCGCAATTGCACGGTACAAAGATCATGAATTTGCTAGAGTAGATTTGACAACTTTTGATCAAGGCCACAAGAATGCCACTATTCTTGATGTAGTGTTTGAAGGAGAGGGTCGGATCGAAAGTGATGAACAACTTTCCGAGTATAATAAAGACACACGATTAGGGATCTATAATAACTTGGCTATTGATTTGGATCTTTTAATCGTTTATAAGTTTGGAATTTACAAGACCGGTCGCTTCAAGCCACCAATTGTGCAATGTCCTCCTTTGaatctttctttgatttctaaTGGTAGTAACTCATCACCACATTCTTTTCATAATACAAATTGTAGAACTGACTCTTTCTTTTTATCTCGATAG 666 0.3559 METAMAMNSKPSCEIIFYTLTMVLILSGIIFFYIMTYASSNVKCQLTEASLSKFNHIRHNISYEFNHTSYNASYDTLHYKLEAKITSRNPNKYIKVYYPKITAIARYKDHEFARVDLTTFDQGHKNATILDVVFEGEGRIESDEQLSEYNKDTRLGIYNNLAIDLDLLIVYKFGIYKTGRFKPPIVQCPPLNLSLISNGSNSSPHSFHNTNCRTDSFFLSR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04153 221 PANTHER HARPIN-INDUCED 1 64 216 - -
Tsu08g04153 221 PANTHER HARPIN-INDUCED 1 21 65 - -
Tsu08g04153 221 PANTHER OS05G0367900 PROTEIN 21 65 IPR044839 GO:0098542
Tsu08g04153 221 PANTHER OS05G0367900 PROTEIN 64 216 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04153 Tsu-Chr8 59713212 59713877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04153 39 203 SNARE and Associated Proteins AT1G32270 25.000 5.13e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04153 - - gmx:100783747 152.525