Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04080 ATGATGGAGGAAAATACTACTAGTTCATGGTTAAGAAGAGCGAAATACTCGCAAACAGTGTGTCATCGTTTGGATACAAATAGTTTGAATGCTAATTCAATCCGCGTTCAATTGGATGAAATTTCGAAACCTTCTTCAAATGTTAAGGAAAACCTTTTAACCAACAAGCAAAGATCTTTGTCGCCATTGCCTAGAACTTTTGTTAATGATGTCTTTAGGGAAGCTAGACATGAAGCGAAGAGGTTCTCGACACCAGGTCGTAGGAGGGATAACAAGAGAATTATGGGAAAGGTGTCGAATAAGGATACTCGGGAAGCATCACCCAAATTATCGAGTTCGAAATCAGTTTTGAACAGTCAGAATCAGCAAAGGGAGGTGTCCAAGAACATGAGCAAGGATGGTTCATGGAGTAAGTATCTTGAAAACGGTAGTGGCGGCGGTGGTGGAAAGGTTACTGCTTTGGAAACAGCTGAGGAATGGACTATTGACATGTCTAAGCTGTTTCTTGGCCATAAGTTCGCTCATGGCGCTCATAGTAGGCTGTATCATGGTGTATATAAGGATGAGTCTGTAGCTGTTAAAATCATTAGGGCACCCGACGACGATGAAAACGGAGACTTGACTGCTAAATTAGAGAATCAGTTCATTAGAGAGGTCACCCTTTTATCTCGCCTCCACCATCGAAATGTTATAAAGTTCATAGCTGCAAGCAGAAACCCGCCGGTTTATTGTATTATCACAGAATATCTACCTGAAGGTTCCTTGAGGGCATTTTTGCATAAGTTGGAGCACAGAACTATTTCTCTCGAGAAGCTAATAGCTTTTGCTCTCGATATTGCTCGTGGAATGGCATATATACACTCTCAAGGTGTCATTCATAGAGATCTTAAACCAGAGAATGTCCTTATTGATGAAAACTTTCACCTTAAACTTGCTGATTTCGGCATTGCTTGTGAGGAGTCAATCTGTGACTTATTGGCGGATGATCCCGGCACCTACCGGTGGATGGCACCTGAAATGATCAAACGAAAATCCTATGGAAGAAAGGTTGATGTCTACGGTTTTGGGCTTATGTTATGGGAAATGTTGACGGGAACAATTCCATACGTGGATATGAATCCAATGCAGGCTGCTTTTGCAGTTGTGAATAAGAAATTAAGGCCAGCTATTCCTCCAGAATGCCCACCTGCAATGCGAGCTTTAATCGAGCAATGTTGGGCGTTGCAACCAGATAAGAGACCTGATTTCTGGCAAATCGTCAAGGTGTTGGAACAATTTGAATCTTCTATTGCTCGTGACGGAACCCTGACTCTGGTGCAGAATCCTCGTTGCCATGATCAAAAGAAAGGACTTCTTCATTGGATTCAAAAGCTTGGTCCTATTCAAAATAGTGGCCCTAAGCCTAAACCAAAGTTCACATGA 1422 0.4219 MMEENTTSSWLRRAKYSQTVCHRLDTNSLNANSIRVQLDEISKPSSNVKENLLTNKQRSLSPLPRTFVNDVFREARHEAKRFSTPGRRRDNKRIMGKVSNKDTREASPKLSSSKSVLNSQNQQREVSKNMSKDGSWSKYLENGSGGGGGKVTALETAEEWTIDMSKLFLGHKFAHGAHSRLYHGVYKDESVAVKIIRAPDDDENGDLTAKLENQFIREVTLLSRLHHRNVIKFIAASRNPPVYCIITEYLPEGSLRAFLHKLEHRTISLEKLIAFALDIARGMAYIHSQGVIHRDLKPENVLIDENFHLKLADFGIACEESICDLLADDPGTYRWMAPEMIKRKSYGRKVDVYGFGLMLWEMLTGTIPYVDMNPMQAAFAVVNKKLRPAIPPECPPAMRALIEQCWALQPDKRPDFWQIVKVLEQFESSIARDGTLTLVQNPRCHDQKKGLLHWIQKLGPIQNSGPKPKPKFT 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04080 473 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 6 450 - -
Tsu08g04080 473 PRINTS Tyrosine kinase catalytic domain signature 331 341 IPR001245 GO:0004672|GO:0006468
Tsu08g04080 473 PRINTS Tyrosine kinase catalytic domain signature 394 416 IPR001245 GO:0004672|GO:0006468
Tsu08g04080 473 PRINTS Tyrosine kinase catalytic domain signature 247 260 IPR001245 GO:0004672|GO:0006468
Tsu08g04080 473 PRINTS Tyrosine kinase catalytic domain signature 285 303 IPR001245 GO:0004672|GO:0006468
Tsu08g04080 473 PRINTS Tyrosine kinase catalytic domain signature 350 372 IPR001245 GO:0004672|GO:0006468
Tsu08g04080 473 MobiDBLite consensus disorder prediction 109 138 - -
Tsu08g04080 473 Gene3D Phosphorylase Kinase; domain 1 155 250 - -
Tsu08g04080 473 PANTHER TYROSINE KINASE FAMILY PROTEIN 6 450 - -
Tsu08g04080 473 SMART serkin_6 167 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g04080 473 Gene3D Transferase(Phosphotransferase) domain 1 251 452 - -
Tsu08g04080 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Tsu08g04080 473 Pfam Protein tyrosine and serine/threonine kinase 169 423 IPR001245 GO:0004672|GO:0006468
Tsu08g04080 473 MobiDBLite consensus disorder prediction 78 148 - -
Tsu08g04080 473 ProSiteProfiles Protein kinase domain profile. 167 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g04080 473 MobiDBLite consensus disorder prediction 78 108 - -
Tsu08g04080 473 CDD STKc_MAP3K-like 174 423 - -
Tsu08g04080 473 SUPERFAMILY Protein kinase-like (PK-like) 154 423 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04080 Tsu-Chr8 59009651 59013684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04080 2 473 MAP Kinase Kinase Kinase AT5G58950 54.034 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tsu08g04080 PK_Tyr_Ser-Thr 4.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04080 - - gmx:100500590 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01932 02 18213691 18217372 Tsu08g04080 08 59009651 59013684 PCT