Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04037 ATGGATGCTGAAGAAGTAGAGAATAATACTCAGAAGGGTGATGATGGGGGTGAAAATAGCAATGagaataacaataacaacaataacaatgGAAGTAATAGCAAAATTATGAGTTCAAGTGAAGGTCAGAGTAAACCCAAGCGTCAGATGAAAACCCCTTTTCAGCTTGAAATGTTAGAGAAAGCTTATGCTTTGGAGACTTACCCTTCGGAAAGTACGAGAGTAGAGCTGTCGGAGAAGTTGGGGTTGTCGGATCGACAGTTACAGATGTGGTTCTGTCACCGGAGGTTGAAAGACAAGAAGGAGTTACCAACTAAGAAGCCAAAAAAGGTGCCACCTTTGCCGGATTCTCCTACTGATGAACCTAATCCCAAGTTGGTTATTGAGCCCTTAAACGAATATGGATCCGGGTCGGGTTCCGGGTCTAGTCCATTTGCTCGGCCGGAGTTGAGGAATGTCGTGCCTCCTCGGACTTACTATGAGTCGCCGCAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAAGCACAGTTAGGAGAGCCTTTAAGGGAAGATGGACCTATTTTAGGAATTGAGTTTGATCCATTGCCACCTGATGCATTTGGGGCACCATTAGCTGTTGCAGAACAGCAGAAGCGGCCTAGTCTTGCCTACGACAGTAAAATATATGAAAGACATGAAGTTAGAACGAATAAGGCAATGACAAGGACATTCCCTGAATATCCATTTGTTCCGAACCAGTCCAGCATTAGATCTGATACGTTTGGACAATTGAGCCAGCCTCATTTATATGATCCAATGGAAGGTCCTACTAGAACTCCTCCTTTTCCGATTGCTAATGAACATCTACCTAGAACTCATGCTACTCAAAGCCATTCTTCCCGTGCTCGCCTTTCGTCTCAACAGGACAAGCACATGACTCCCTATACTTCCCCGCCCCCACTTTTGTCTCAACATGACAAAAAAGTGATTCCCTATCCATCTCCTCCTCGAGACAATGATGCTGTCCCGAGAAGGGAACCTCACATAAATATAGCCAATATTGGTATGAACTCCCAATTCACTGATCACCAAATTGTTGGACAAGAAAATTCTTTAGCTTTACCTGGTGGACAAGTTTTCCATAATGATGCGGTGCTGCGGGTGGAGAAGAAACGAAAGGGTGACGATGCTAGAGTTGCAAAGGAAGTTGAAGCCTATGAAATAAGGATGAAGAAAGAACTTGAGAAACAAGATATCCTAAGAAGAAAGAATGAAGAGCGAATGAGGAAGGAAATGGAAAGACAAGATCGTGAGAGAAGGAAGGAAGAAGAGAGGCTGATGCGTGAGAGACTGCGAGAAGAGGAAAGATCAAGGCGTGAGCAAAAGCGGGAGATAGAACGAAGGGAAAAATATCTGATGAAAGAACATTTAAGAgcTGAGAAAAGGAAGCAGAAAGAAGAGATTCGCAGAGAGAAAGAGGCAGAGAGAAGGAAAGCGGCCCTTGAAAAGGCAAATGCTCGTAGAATAGCGAAAGAATCTATGGAGCTCCTTGAGGATGAACAGCTGGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGGCTGTCCTCTATTATCCAAATTGATCTTGATACTTTGCAAAACCTTGATTCATTTAGGGATTCCTTGTGTGTTTTCCCGCCAAAAAGTGTGAAGCTAAAAAAACCATTTGCTATCCAGCCCTGGATGAACTCGGATCAAGATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTAATTACCTTTGCTGATGTTCTGGAGTTATGGCCGTTTACTCTTGATGAATTTGTTCAAGCATTTCATGATTATGATTCAAGATTGTTGGGTGAGATACATGTTGCTGTTCTTAAAGTGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGAGTGAACCAGAATGGAGCTGCTAATCCTGCCGGTGGCCATCCAGAGATTGTGGAAGGAGCGTATACATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAATTGACATGGCCTGAAATTTTGCGACAGTTAGCGCTATCTGCAGGATTTGGACCAAAGCTGAGAAAAAGAAGTATTACGTGGTCATATCCAAATGATAAAGAAGAGGGAAGAAGTGGTGAAGATGTCATTTCTACACTTCGTAATGGTTCAGCAGCTGTAAGTGCAGTGGCAAAAATGCAAGAGAAAGGTCTATTAGCTCCTCGAAGATCGAGACATAGGTTAACTCCAGGAACCGTAAAATTTGCAGCATTTCATGTTCTCTCTCTTGAGGGCAGCAAGGGTTTGAATGTACTAGATCTTGCAGAAAAGATTCAGAAATCTGGTCTTCGGGACTTGACAACAAGCAAGACACCCGAAGCATCAATTTCGGTTGCTTTGACTAGAGATGGCAAACTTTTCGAACGAATAGCTCCATCAACATATCGTGTACGAACCGCATTTAGAAAGGATCCTGTTGATGCCGAGGCCATTCTTTCAGAAGCAAGAAAGAAAATCCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCCGATGATgttgaaagagaagaagagtCAGAAAGTGAAGTTGATGAGGATCCTGAAGACGATGATTTGGTAAATCCTTCAAGTGGAAACCAAAATACAGAACAGTATCATGATATGAACGTTTCCTCAGTAAATGTAAACGAAAATCCGGGCCATGAAGTAGAACTTATTCAAAATGAGCTTGATACTGATCTGCCTTGTTTTCTTGAGAATGGTTCCACTTCTAAGGATGTTAATCTTCCCACTTCTGTCACCATACAACCCGTTGCTTTTGAAGATCTAAATACTGGAAATCTTGTTGATAATAATATGGAAATTGATGAAAGCAAGTCTGGAGAATCATGGGTTCAAGGGCTTACCGAAGGAGAATATTCCGATCTTAGTGTAGAAGAGCGTCTAAATGCACTTGTTGCATTGGTTGGGGTGGCAAATGAAGGAAATTCAGTTCGTATTGTTCTTGAGGATCGATTGGAAGCAGCAAATGCTCTGAAAAAGCAAATGTGGGCAGAAGCACAAATAGATAAAGTTCGTTTAAAAGATGAttatattagtaaattagaTTTTCAACCACTTGCTggaaataaaattgaaacacaAGAGGGAAACCAAAGCCCATTGCTCGACATCAATATTAACAACATTAAGAATGAAGCTTCACCCAGCACTGCAGAAAACCAAAAAGGAGCTTCTTCTGCACAGAGCCTACTTATTGAAAAGCCATCAACAGTTCAAGATTTCGGCACAGGCACAGGTCCAGATACCTTTCAGAGTCAGGTAGCTGCACAATATTCAAAAAGATCACGATCACAGTTGAAATCCTATATTTCCCACCTAGCAGAGGAGATGTATGTCTACAGATCTTTACCCCTTGGCCAAGACCGCAGGCGTAATCGATATTGGCAATTTGTTGCATCTGCTTCTAGTAATGATCCTGGTTCTGGCAGGATCTTTGTTGAACATCATGATGGCAGTTGGAGGCTTATTGATTCCGAAGAGGACTTTGATATTCTTTTGACATCACTGGACTCACGTGGCATCAGGGAATCTCATTTGCGCTTAATGTTGCAAAAGATTGAGAAATCCTTTAAAGAAAATGTTCGAAAAAATACACAATATGCAAAAATCGGAAGCATAGGGGAAGGCTCTGTTAAATTTGAAGCTAGTGAAAAATATCCAATGCCTGAGCGCCATTCAGGATCTGACAGTCCTAGCAGAACCCTTCATGACTTGAACTTTGGTATATCCGAGACTTCGTCATCCTTCAAAGTTGAGCTTTGGAAAAGTGAGAATGAAAAGAAAGCGGCACTGAGAAGGTATCGAGATTTTCAGAAGTGGATGTGGAAAGAATGCTATAACTCATCAATTTTATGTGCAATGAAACTTGGGGTAAAGAGATGTAAACCTCAGGTGGATATATGTGAAATCTGTCTCAATCCTTATTTTGTCGAAGACTCCCATTGCAATTCCTGCCATCGCACGTTTCAGTCAGATAATGGGTTTAGTTTTTCTGAACATGCATTTCAATGTGTCGGCAATTTATCCAAAGATATTTGTATTATGGAGCATTCTCTTCCCATAAGGACTAGATTGCTCAAGGTCCTGCTGTCATATATGGAGGCATCTGTTCTCTCTGAAGCATTTGGAACAATTTGGACAACTGATTTTAGGAAGCGTTGGGGTGTGAAGTTGAGTAAATCATCATCTATTGAGGAACTTTTACAGATGTTGACCCTTTTTGAAAAAGCACTACGGCGAGATTTTCTGTCATCAGACTTCTCTACAACAGACGAATTGTTGGGATTAAGCAGTAAGTCAAAAAGTGCTGCGCATGTGTCTGCTGATCCTGAATCAGTTGCTCTACTTCCATGGATCCCACAAACCACTGCAGCATTGTCTCTCAGGCTTTTTGAGTTCGATTCATCCATCAGCTATGTAAAACTCGAGAAACTTGAGCCTGTTGAGGGAAAAGAAGCAACAGAATACATTAGGCTTCCATCAAGATATACTCCCTTCAAGCCTAATAGGGAGGTTGAGCCAGCAGCTGTTGATCTTGATGGATTCACCAAAGTTAAATCCTCTGCTAAAATTGTGCGAAGCAATAAACGTGGACGAGGGGCTAGTGATCATGGGCGGAGTAAAAATCTGTCTAAACGGATGTACAATTCCAAACGAGATGCTGGACGTCGAAACGTTAAGATCACCGAGAATCTAAGTCAAAGACTAAAACAGCAGGGACGAGGAACGCAAGGACAAGGAGGTGGACGAGGTCGCCGAACGGTCAGAAAACGTAGAGTAGAAAAAAGAGCTGTTGAAGATTTGTTGCTGGGACATGCAGCGGCCAGTCATAGCTCCATGAGTGGGAGAGAACCATTTAGAAGCTTTCATGAAGAATGGGATGATGGAGAAAAGGCGAGTCCCATGACTACTGTTCACATTGGGGTTGCTGAAAATAGTAACAGTGCTGAAGAGGTGGAATCTGATGATAATGCTCAAGCAATGGAATTTGATGATAATGTTCAAGCAGTGGAATATGATGATAATGCTCAAGCAATGGAATCTGATGATGATGCTCAAGCAGTAGAATATGATCATGGAAACTGGGAGATAGGTTATAATGGTGTCTCTCCTAACGGATGGAATAGGGATTTGGTTGGAATGAGTGATGAAGATGTGGATGCTTTTGAAGATGGCAATGACAACGACAATGGCAATGTTATTGGCTTTGAAGAGAATGAAGAGGAAGATTCCGAGGAAGATGTTATGAGTGAAGAAGGTTCAGATGGCATGGCGAATAGAGTAGAGAATGTAGGAGGCTCATATTTGTCTGTCTCTGAAGATTCTTCTGATTAG 5415 0.415 MDAEEVENNTQKGDDGGENSNENNNNNNNNGSNSKIMSSSEGQSKPKRQMKTPFQLEMLEKAYALETYPSESTRVELSEKLGLSDRQLQMWFCHRRLKDKKELPTKKPKKVPPLPDSPTDEPNPKLVIEPLNEYGSGSGSGSSPFARPELRNVVPPRTYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPLAVAEQQKRPSLAYDSKIYERHEVRTNKAMTRTFPEYPFVPNQSSIRSDTFGQLSQPHLYDPMEGPTRTPPFPIANEHLPRTHATQSHSSRARLSSQQDKHMTPYTSPPPLLSQHDKKVIPYPSPPRDNDAVPRREPHINIANIGMNSQFTDHQIVGQENSLALPGGQVFHNDAVLRVEKKRKGDDARVAKEVEAYEIRMKKELEKQDILRRKNEERMRKEMERQDRERRKEEERLMRERLREEERSRREQKREIERREKYLMKEHLRAEKRKQKEEIRREKEAERRKAALEKANARRIAKESMELLEDEQLELMELAAASKGLSSIIQIDLDTLQNLDSFRDSLCVFPPKSVKLKKPFAIQPWMNSDQDVGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVAVLKVIIKDIEDVARTPSTGLGVNQNGAANPAGGHPEIVEGAYTWGFDIRNWQKNLNQLTWPEILRQLALSAGFGPKLRKRSITWSYPNDKEEGRSGEDVISTLRNGSAAVSAVAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLNVLDLAEKIQKSGLRDLTTSKTPEASISVALTRDGKLFERIAPSTYRVRTAFRKDPVDAEAILSEARKKIQIFENGFLAGEDADDVEREEESESEVDEDPEDDDLVNPSSGNQNTEQYHDMNVSSVNVNENPGHEVELIQNELDTDLPCFLENGSTSKDVNLPTSVTIQPVAFEDLNTGNLVDNNMEIDESKSGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSVRIVLEDRLEAANALKKQMWAEAQIDKVRLKDDYISKLDFQPLAGNKIETQEGNQSPLLDININNIKNEASPSTAENQKGASSAQSLLIEKPSTVQDFGTGTGPDTFQSQVAAQYSKRSRSQLKSYISHLAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEHHDGSWRLIDSEEDFDILLTSLDSRGIRESHLRLMLQKIEKSFKENVRKNTQYAKIGSIGEGSVKFEASEKYPMPERHSGSDSPSRTLHDLNFGISETSSSFKVELWKSENEKKAALRRYRDFQKWMWKECYNSSILCAMKLGVKRCKPQVDICEICLNPYFVEDSHCNSCHRTFQSDNGFSFSEHAFQCVGNLSKDICIMEHSLPIRTRLLKVLLSYMEASVLSEAFGTIWTTDFRKRWGVKLSKSSSIEELLQMLTLFEKALRRDFLSSDFSTTDELLGLSSKSKSAAHVSADPESVALLPWIPQTTAALSLRLFEFDSSISYVKLEKLEPVEGKEATEYIRLPSRYTPFKPNREVEPAAVDLDGFTKVKSSAKIVRSNKRGRGASDHGRSKNLSKRMYNSKRDAGRRNVKITENLSQRLKQQGRGTQGQGGGRGRRTVRKRRVEKRAVEDLLLGHAAASHSSMSGREPFRSFHEEWDDGEKASPMTTVHIGVAENSNSAEEVESDDNAQAMEFDDNVQAVEYDDNAQAMESDDDAQAVEYDHGNWEIGYNGVSPNGWNRDLVGMSDEDVDAFEDGNDNDNGNVIGFEENEEEDSEEDVMSEEGSDGMANRVENVGGSYLSVSEDSSD 1804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 1587 1605 - -
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 1552 1620 - -
Tsu08g04037 1804 Pfam Homeodomain 45 101 IPR001356 GO:0003677
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 287 321 - -
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 853 890 - -
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 1748 1804 - -
Tsu08g04037 1804 SMART HOX_1 44 106 IPR001356 GO:0003677
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 1556 1586 - -
Tsu08g04037 1804 Pfam DDT domain 574 629 IPR018501 -
Tsu08g04037 1804 ProSiteProfiles HARE-type HTH domain profile. 755 824 IPR007759 GO:0006355
Tsu08g04037 1804 SMART testlast3 573 632 IPR018501 -
Tsu08g04037 1804 CDD homeodomain 47 102 IPR001356 GO:0003677
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 101 123 - -
Tsu08g04037 1804 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1141 1213 IPR028941 -
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 13 50 - -
Tsu08g04037 1804 Coils Coil 469 504 - -
Tsu08g04037 1804 ProSiteProfiles 'Homeobox' domain profile. 42 102 IPR001356 GO:0003677
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 1 55 - -
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 1761 1779 - -
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 856 878 - -
Tsu08g04037 1804 Pfam HB1, ASXL, restriction endonuclease HTH domain 755 823 IPR007759 GO:0006355
Tsu08g04037 1804 ProSiteProfiles DDT domain profile. 573 632 IPR018501 -
Tsu08g04037 1804 MobiDBLite consensus disorder prediction 287 315 - -
Tsu08g04037 1804 PANTHER HOMEOBOX DOMAIN PROTEIN 13 1804 - -
Tsu08g04037 1804 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 966 1009 IPR028942 -
Tsu08g04037 1804 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 13 1804 IPR044977 GO:0006357
Tsu08g04037 1804 Coils Coil 398 466 - -
Tsu08g04037 1804 Gene3D - 44 102 - -
Tsu08g04037 1804 SUPERFAMILY Homeodomain-like 32 101 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04037 Tsu-Chr8 58615834 58624555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04037 38 1727 Homeobox Transcription Factor Family AT1G28420 48.350 0.0 1319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Tsu08g04037 WSD 5.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04037 - - gmx:100777465 2358.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g04037 08 58615834 58624555 Tsu08g04037 08 58615834 58624555 ECH
Tsu02g01979 02 19093495 19103661 Tsu08g04037 08 58615834 58624555 PCT