Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04016 ATGGCGCTGGCAGCTGCTGTTGGTGAAGCTTTTATCTCTGGTTTCATTGAAGTTGTCCTTGATAGGCTTGCTTCTCCTGAGCTTGTTGACTTGATCCGTGGAAAGAAAGTTGACTTCAACTTGGTTCAAAGGTTGAAGAACACTCTTTATGCTGTTGAAGTTGTGCTAAATGATGCTGAACAGAAACAGTTCAAAGACTCTTCTGTTAACAAATGGCTTGATGACCTCAAAGATGCTGTTTATGTTGCTGATGACATTTTGGATCACATCTCTACCAAAGCTGCTATTTCCAACAACAAGAAGGTGAGTACTAACTACATCTCTCGCTTTTTCAACTTTGAAGAGAGAGATATGGTTTGTAAGTTGGAAGATATTGTTGCTAGACTAGAATACATTCTCAAATTCAAAGATATTCTTGGCCTTCAACATATTTCTATTGACCACTCTTCATGGAGAACTCCATCCACCTCTCTAGATGATGGATCTAACATATTTGGTAGGGATCAAGACAAAGAGGCCATACTCAAATTACTGTtagatgataatgatgatgatgctaAGATTTCTGTGATCCCAATAGTTGGCATGGGTGGGGTGGGAAAAACCACTTTGGCCCAATCTGTGTACAACCATGGCAGTGTAAAGCAGAAGTTTGATGTTCAAGCATGGGCTTGTGTTTCTGACCATTTTGATGAATTCAAGGTTACAAAGGCAATCATGGAGGCAGTTACTAGAAATGCTTGTAATATAACTAACAAAGAGTTGCTTCATCTTGatttgaaggaaaaattgaCCAGAAAAAAGTTCTTAATAGTTTTGGATGATGTTTGGACCGAGGATTATGACGATTGGAATTCTCTTTTAAGGCCTCTTCAATACGGAACTATGGGAAGTAAAATTCTTGTAACAACCCGTATTGATAAAGTTGCATATATGGTTCAAACTTCTCAAACTTGCCATCTTGAGCAATTGTCTGATGAAGATTGTTGGTCGGTATTTGCAAACCGAGCTTTCCTTTCTTCAAAAGAATCCACTGAGAATATGGATCTCTACAAAATTGGAAAAGAGATTGTTAGAAAATGTAAGGGATTGCCTTTAGCTGCACAATCACTTGGGGGCTTGTTGCGAGGTAAACGTGACATCAAGGAATGGAATAATATACTAAATAGCAACATTTGGGAAAATGAGAGTAAGATCATTCCGGCACTAAGAATTAGTTATCATTATCTCCCTCCTTATTTGAAACGTTGCTTTGTTTATTGTTCGTTGTATCCTAAGGATTATCAATTTAAGAAAGATGATTTGATCATGTTATGGATGGCCGAAGATCTTTTACAGTCTCCAAAAAATGGGAAGACTTTAGAAGAAGTTGGTTATGGGTATTTTGATGACTTAGCTTCAAGATCATTTTTTCAACGTTCCGAAAATGGGAGTTTTGTGATGCATGATCTGGTGCATGATTTAGCAACATTGCTCGGTGGACAGTTCTATTTAAGAAGAGAAGAACTTGCTAATGAAACGGAGATTGGTACCATGGCTCGTCATTTATCATTGAGCAAGTTCAGTGATCCAATCCATGAAAACTATTATGTTTTTGGCCAAGCAAAACATCTTAGGACGTTTTTGGCAATCAATTTTAGAAGTCCTCCATTCAACAATGAAAAGGCACCACgcataattttgtcaaatttgaaGTGCTTGAGAGTTTTGTCATTTCGAGGATTTCCTAATCTTGATGCATTGCCTGATTCGATAGGTGAACTGATCCATTTGCGATATTTGGATCTCTCTACTACAAAAATAACGACATTGCCAGAGTCATTGTGTAATCTTTATAATCTTCAAACGTTGAAGTTGTGTTATTGCAAAAAACTAACAAGGCTTCCCAATGACATGCAAAATCTTGTGAATTTGCGGCATCTTGATATCAGGGGATGTTGGAAGTTAAAAGAGATGCCTAACGAAATgagcaaattaaaaaatttgcaaCATTTGAGTTGCTTTCATGTGGGCAGGCATGGAGAGAAAGGGATCAAGGAATTGGGAACACTTTCAAATCTTCAAGGATCACTTTCCATTACAAAATTAGAGAATGTTATCAACAGCTCAGAAGCATCCGAGGCAAAGATAATGGataagatattccttgaggcaTTATTGTTGTCATGGTCTGAAGATGCAAAGGACCATTTTACAGATTCACAAAGTGAGATGGATATACTTGACAAGTTACAGCCTACCATTAACCTGAAAAGGCTAAATGTAAATGGATACAGGGGCACAAAATTTCCAGAATGGGTTGGAAATTCTCCCTACCACAATTTGACTGAGTtatgtttgtttgattgttcGAATTGTTGTATCCTTCCTACACTTGGACAACTAAGCTCTCTTAAGACATTGTCGATGAGAAGAATGAGTATGCTGGAGATCATTGGATATGAATATGGAGATTCCTTTCCTGGGACACTCTTTCCCTCTCTTGAATATTTGGAGTTTCGTGAAATGTCATGTTGGGAAATGTGGCATCATTCCCATGATCCTGATAATTCTTTTCCTGTCCTGAAGATTCTTGAGATTATTGATTGTCCCAGATTAAATGGAGATTTGCCATTTCATCTTCCTATGCTGAAAACAATTAAGATTGAACGATGCAACAAGCTTGGCTCATCTCTCCCAAAGGCTTTTTCCATCCGAGAGTTAAAGATATTTAAAAGCAATAAAGTAGCCTTGCATGAACTGCCCCTTTCATTAGAAGTATTAAGAATTCAAGGAACAGAGGTGATAGAGTCTGTCTTTGAAGCTATTGCCATCACCTTACCGACATCTCTTCAAAGATTAGTTATCAAAGATTGTTCGACTGCCATATCTTTTCCAGGAGATTGTTTACCCACATCCTTGAAGGTTTTGTACATCAGAAAAtgtaaaaatctaaattttccaAAGCAAAACCACCGGCATGAGTCACTTCAGTCTTTGGAAATAGTTAGGAGTTGTGATTCTCTTTCAACCCTCTCACTAGACAACCTTCCGAACCTCCATCATCTCGAAATCCATAATTGTGAAAACATAGAACATCTTTCCGCTTCGAAGATTCTTTCAAATCTCAGTTATATTGCCATTAGTAACTGCCCCAAATTTGTATCATTCCCAAGAGAAGGATTGTCTGCACCCAACTTGGAATCATTGCGTATCATCAAGTGCAGTAATTTAAAAGCATTGCCTTGTCACATAAATACTCTTCTCTCAAAGTTACAAGAGATGTATATAGATAAATGCCCAGAAATGGAGACGTTTCCTGAAAGGGGTATGCTGCCTATCTTGAGATTACTCCGTATCTGGAATTGTGAGAAATTATTGAGGAACCCATCTCTAACTTCTTTTGATATGATTTCCCATCTTTCCATTGCGGGACCATGTGATGGTGTAGAGTCATTCCCTAATAAGGGTTTTGCGTTGCTGCCTCCATCCCTTACCTCTCTAATTCTATGGGGAATGTCAAGTTTGCAGACGTTGGAGTGCACTCTGCTTCTCCACCTAACATCCCTCCAACAATTAACAATTAGAGTGTGTCCTAAGCTGGAGAATATGGAGGGGGAAAGGCTGCCTGTTTCTCTAATAAAACTTCAAATCTATAAATGTCCTCTGTTGGAAGAACGGTGCCGCATGAAACACCCACAAATTTGGCCCAAAATTTCCCACATCAAAGTTATTTGTTCAAGGTCTCTGGATGGTTGTAGagtcacaacaaatattttattttacattttcagatTATGTTggaaatatcaattattcttgATTTGGTTTGTACAATCAAGTTCTTAG 3828 0.3662 MALAAAVGEAFISGFIEVVLDRLASPELVDLIRGKKVDFNLVQRLKNTLYAVEVVLNDAEQKQFKDSSVNKWLDDLKDAVYVADDILDHISTKAAISNNKKVSTNYISRFFNFEERDMVCKLEDIVARLEYILKFKDILGLQHISIDHSSWRTPSTSLDDGSNIFGRDQDKEAILKLLLDDNDDDAKISVIPIVGMGGVGKTTLAQSVYNHGSVKQKFDVQAWACVSDHFDEFKVTKAIMEAVTRNACNITNKELLHLDLKEKLTRKKFLIVLDDVWTEDYDDWNSLLRPLQYGTMGSKILVTTRIDKVAYMVQTSQTCHLEQLSDEDCWSVFANRAFLSSKESTENMDLYKIGKEIVRKCKGLPLAAQSLGGLLRGKRDIKEWNNILNSNIWENESKIIPALRISYHYLPPYLKRCFVYCSLYPKDYQFKKDDLIMLWMAEDLLQSPKNGKTLEEVGYGYFDDLASRSFFQRSENGSFVMHDLVHDLATLLGGQFYLRREELANETEIGTMARHLSLSKFSDPIHENYYVFGQAKHLRTFLAINFRSPPFNNEKAPRIILSNLKCLRVLSFRGFPNLDALPDSIGELIHLRYLDLSTTKITTLPESLCNLYNLQTLKLCYCKKLTRLPNDMQNLVNLRHLDIRGCWKLKEMPNEMSKLKNLQHLSCFHVGRHGEKGIKELGTLSNLQGSLSITKLENVINSSEASEAKIMDKIFLEALLLSWSEDAKDHFTDSQSEMDILDKLQPTINLKRLNVNGYRGTKFPEWVGNSPYHNLTELCLFDCSNCCILPTLGQLSSLKTLSMRRMSMLEIIGYEYGDSFPGTLFPSLEYLEFREMSCWEMWHHSHDPDNSFPVLKILEIIDCPRLNGDLPFHLPMLKTIKIERCNKLGSSLPKAFSIRELKIFKSNKVALHELPLSLEVLRIQGTEVIESVFEAIAITLPTSLQRLVIKDCSTAISFPGDCLPTSLKVLYIRKCKNLNFPKQNHRHESLQSLEIVRSCDSLSTLSLDNLPNLHHLEIHNCENIEHLSASKILSNLSYIAISNCPKFVSFPREGLSAPNLESLRIIKCSNLKALPCHINTLLSKLQEMYIDKCPEMETFPERGMLPILRLLRIWNCEKLLRNPSLTSFDMISHLSIAGPCDGVESFPNKGFALLPPSLTSLILWGMSSLQTLECTLLLHLTSLQQLTIRVCPKLENMEGERLPVSLIKLQIYKCPLLEERCRMKHPQIWPKISHIKVICSRSLDGCRVTTNILFYIFRLCWKYQLFLIWFVQSSS 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04016 1275 Gene3D - 406 490 IPR036388 -
Tsu08g04016 1275 PANTHER DISEASE RESISTANCE PROTEIN RP 36 957 IPR044974 GO:0006952
Tsu08g04016 1275 Pfam Rx N-terminal domain 11 99 IPR041118 -
Tsu08g04016 1275 Gene3D - 323 405 IPR042197 -
Tsu08g04016 1275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 421 IPR027417 -
Tsu08g04016 1275 Pfam NB-ARC domain 168 390 IPR002182 GO:0043531
Tsu08g04016 1275 Gene3D - 150 320 IPR027417 -
Tsu08g04016 1275 Gene3D - 16 129 - -
Tsu08g04016 1275 Pfam Leucine rich repeat 590 646 IPR001611 GO:0005515
Tsu08g04016 1275 PRINTS Disease resistance protein signature 190 205 - -
Tsu08g04016 1275 PRINTS Disease resistance protein signature 263 277 - -
Tsu08g04016 1275 PRINTS Disease resistance protein signature 361 375 - -
Tsu08g04016 1275 PRINTS Disease resistance protein signature 633 649 - -
Tsu08g04016 1275 Gene3D Ribonuclease Inhibitor 964 1105 IPR032675 -
Tsu08g04016 1275 SUPERFAMILY L domain-like 899 1232 - -
Tsu08g04016 1275 Gene3D Ribonuclease Inhibitor 530 916 IPR032675 -
Tsu08g04016 1275 SUPERFAMILY L domain-like 480 893 - -
Tsu08g04016 1275 Coils Coil 42 62 - -
Tsu08g04016 1275 PANTHER OS05G0414200 PROTEIN 36 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04016 Tsu-Chr8 58408963 58413181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04016 188 653 WRKY Transcription Factor Family AT5G45050 24.225 6.99e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04016 - - cam:101511364 1519.6