Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04007 ATGAAGAAGATTTCTAAAGGCAGCTGTAAGACAGCATCACACAGTCTCTTCAAGGACAAGGCAAAGAACCATGTTGATGATCTGCAGATGATGTTTCTTGATCTGCAGTTTGTCAGGAAGGAGAGTCGTTCCATTGATGCCGCACTTCTTGAGGAGCAAGTCAATCAGATGCTTCTGGAGTGGAGGGCCGATCTAAATGAGCCCTCTTCTGCTGCTTCCTTAAAGCAGGAAGGCAGTCATGGATCATTCTCAACCGATATTTGTAGGCTATTGCAGCTCTGTGAGCATGAAGATGATGCCACTAGTCTATTAGCTGTGCCTCGGCATGAACCTAATGATCAGATTATGCAGACTGATGCTATGGTGATATTTCAAGAGGCACCTACCTTGTGTCATGGCATAGCCCCAGTTCTATGCCCTGGTGGAATTGGACTGAAGGATAATTTACTTTTAGCTGCTCTTAGTGCAAAGGCCGAAGGAAAAGATGTTGGCTCCACGGAATGCACCTGGGCATTTGAGAGTGGAAACAGAAAGCAAAGGTCATTGCCTGACTATAATAGGTGGGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGAGGACTAAAAAGATCCTATTACATGGATCCACAACCACTAAACCATTTTGAGTGGCACCTTTATGAGTATGAAATTAGCAAATGTGATTCACGTGCCTTATATCGGTTGGAATTAAAGCGTGTTGATGGGAAGAAGAGCTCCAAGGCAAAGATAACAAGTGATTCTGTTACTAATCTGCAGAAGCGGATAGGAAGACTCTCTGGCGAGTTTCCCTATGATAGCAGACGTTCTGCAAAGGGCAGAGCCAAACCTGATGCCAAGGCTGACATAGGTGGTGTCTATACAGCTTCAAAACAATGCACCATCACATTTTGA 921 0.4441 MKKISKGSCKTASHSLFKDKAKNHVDDLQMMFLDLQFVRKESRSIDAALLEEQVNQMLLEWRADLNEPSSAASLKQEGSHGSFSTDICRLLQLCEHEDDATSLLAVPRHEPNDQIMQTDAMVIFQEAPTLCHGIAPVLCPGGIGLKDNLLLAALSAKAEGKDVGSTECTWAFESGNRKQRSLPDYNRWGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDSRALYRLELKRVDGKKSSKAKITSDSVTNLQKRIGRLSGEFPYDSRRSAKGRAKPDAKADIGGVYTASKQCTITF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04007 306 PANTHER TRANSCRIPTION FACTOR VOZ1 171 300 IPR039277 GO:0006355|GO:0048578
Tsu08g04007 306 PANTHER TRANSCRIPTION FACTOR VOZ1 1 125 IPR039277 GO:0006355|GO:0048578
Tsu08g04007 306 PANTHER TRANSCRIPTION FACTOR VOZ1 132 169 - -
Tsu08g04007 306 PANTHER TRANSCRIPTION FACTOR VOZ1 1 125 - -
Tsu08g04007 306 PANTHER TRANSCRIPTION FACTOR VOZ1 132 169 IPR039277 GO:0006355|GO:0048578
Tsu08g04007 306 PANTHER TRANSCRIPTION FACTOR VOZ1 171 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04007 Tsu-Chr8 58330863 58332344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04007 120 301 VOZ-9 Transcription Factor Family AT1G28520 54.867 1.13e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Tsu08g04007 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04007 - - gmx:100798565 260.381