Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu08g03994 | ATGGAGAATATTCACATTCATAATAGTAATAATCATGATGCAACTTGTGAAGGGTCAATTCTTGAGAATGTATGGGctaaaattataagcaaaaatgatgGAAGAATTGGTACAAATGAAAATGAAGCAGAATGTTCTAACACATGGGAAGATTTGCCTACTCTCGACGAAAGAGACGGTTCGATGGAAATTCTTCAAAGATTGCCAAGTTTAGGAAGATGGATATCAATGGGAGCTGAGTTTTGGGAACAAGTTTTAGATAGTACTATTCTACCTACTACTAGTACTTCAATAAGCAATATAGAAGATTATAGCAACAAAAATAATGAGATTGAAAGTGTTgataaatcaaagaaaaaagtgGAAGGTGGtgtgaaaaaagagaaaaaaacagGTGAAAAACATTATAGAGGAGTAAGGAGAAGACCATGGGGAAAATATGCAGCTGAGATTAGAGATTCGTCGAAGAAAGGCGCAAGAGTTTGGCTTGGTACATTTGATACTGGTGAAGAAGCTGCTTTAGCTTATGATAAAGCTGCTTTGAGAATTAGAGGTTCAAAAGCATGTCTAAATTTTCCAATTGAGAAAGTTataaatgcaaatgcaaatactTTAGGATGTGGTAAGAAAGGAATTGATGATGTTCCAAAGAGAGAAAGTTTATTGGATTCTAAGAAGAGAGGATTAAGGGATAGAGGAGAATTTGTTGATGTGATGAATATTGAAGAACCTGCAACAAAAAAGATGGCAGGGTTGGAAGATATGTTAGAAAATGATGTTTTTGTATTtcaggatttagggattgattACTTGGACAGTTTATTGTCTTCTTTTTGA | 837 | 0.307 | MENIHIHNSNNHDATCEGSILENVWAKIISKNDGRIGTNENEAECSNTWEDLPTLDERDGSMEILQRLPSLGRWISMGAEFWEQVLDSTILPTTSTSISNIEDYSNKNNEIESVDKSKKKVEGGVKKEKKTGEKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTGEEAALAYDKAALRIRGSKACLNFPIEKVINANANTLGCGKKGIDDVPKRESLLDSKKRGLRDRGEFVDVMNIEEPATKKMAGLEDMLENDVFVFQDLGIDYLDSLLSSF | 278 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu08g03994 | 278 | PRINTS | Ethylene responsive element binding protein signature | 136 | 147 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu08g03994 | 278 | PRINTS | Ethylene responsive element binding protein signature | 159 | 175 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu08g03994 | 278 | SMART | rav1_2 | 135 | 199 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu08g03994 | 278 | SUPERFAMILY | DNA-binding domain | 135 | 194 | IPR016177 | GO:0003677 | |
Tsu08g03994 | 278 | Pfam | AP2 domain | 135 | 185 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu08g03994 | 278 | MobiDBLite | consensus disorder prediction | 115 | 132 | - | - | |
Tsu08g03994 | 278 | Gene3D | AP2/ERF domain | 134 | 195 | IPR036955 | GO:0003700|GO:0006355 | |
Tsu08g03994 | 278 | ProSiteProfiles | AP2/ERF domain profile. | 135 | 193 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu08g03994 | 278 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 22 | 278 | - | - | |
Tsu08g03994 | 278 | MobiDBLite | consensus disorder prediction | 115 | 136 | - | - | |
Tsu08g03994 | 278 | CDD | AP2 | 134 | 194 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu08g03994 | 278 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 | 22 | 278 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu08g03994 | Tsu-Chr8 | 58214466 | 58215302 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu08g03994 | 17 | 278 | AP2-EREBP Transcription Factor Family | AT4G18450 | 37.025 | 3.69e-41 | 142 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Tsu08g03994 | AP2 | 4.3e-16 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu08g03994 | - | - | gmx:112999553 | 289.656 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu08g03994 | 08 | 58214466 | 58215302 | Tsu08g03994 | 08 | 58214466 | 58215302 | ECH |