Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03993 ATGAAGaacttattattttcttttatgcaaataataattttcattCTTTGTTTCCTATGTTTCACAACAAAAGTTGAAGCTTTAAACAAAAAAGTCTCTGGATTTTATGTGTTTGGAGATTCCACAGTAGACCCTGGAAACAATAACTATATAAACACACCTTTCAAAGGCAATTTTCCACCATATGGCAAAGATTTCCCAAACAATGTTCCTACTGGAAGATTCTGCAATGGAAAATTATCCACTGATTTCGTTgCTTCTTATGTAGGTGTGAAAAAAGAGCTTCTTCCAGCTTATTTGGACCCAAAAGTTATCACAAATGTTGAAGAGCTTATTACAGGAGTTAGTTTTGCTTCTGCTGGTTCTGGTTATGACCCTCTTACACCATCAATTGCAGGTGTAATTCCAATACCAAAGCAGTTGGAATATTTCAGAGAATTGAAATTGAGGCTAGAAAGTGTGCTTGGTAAACAAGGAACTGAAAATCATGTAAAGAATGCTGTGTTTTTCATTAGTGCTGGTACCAATGATTTTGGtcttaattattttactttgcCAATAAGAAGAAAAAGCTTTACTCTCATAGGCTATCAGCAGTTTGTGCTCCAACATGTGAAAGAATTTTTACAGGGTTTGTTGGCAGAAGGAGCTCAAAGAATTGCAATAACTGGAGTACCTCCAATAGGATGCCTACCCGTGATGATTACCTTGAATTCCCCTAATGCATATTTGCAACGTGATTGTATACAAAAATTTTCATCCACAGCTAGAGACTACAATCTTCTCCTTCAACGTGAATTACAAGCAATACAATTGCAGCTTAACTCATCTAATTCAAATGCTAAGATCTATTACATTGACATATATGAACCCCTAGACAATATGATTCAATCACGTCAAAAATATgGATTTGAAGATATTGATGTTGGATGTTGTGGAAGTGGATACATTGAAGCAACATATTTGTGCAATAAGTTTTCAAATATGTGCCCAGACCGATCTAAGTATTTGTTTTGGGATTCAATTCATCCCACAGAGAAAGCATACCACCAACTCTTCTTGGCTTTCCAATCCACCATTGATTTCATCGTCAACAACTAG 1101 0.3433 MKNLLFSFMQIIIFILCFLCFTTKVEALNKKVSGFYVFGDSTVDPGNNNYINTPFKGNFPPYGKDFPNNVPTGRFCNGKLSTDFVASYVGVKKELLPAYLDPKVITNVEELITGVSFASAGSGYDPLTPSIAGVIPIPKQLEYFRELKLRLESVLGKQGTENHVKNAVFFISAGTNDFGLNYFTLPIRRKSFTLIGYQQFVLQHVKEFLQGLLAEGAQRIAITGVPPIGCLPVMITLNSPNAYLQRDCIQKFSSTARDYNLLLQRELQAIQLQLNSSNSNAKIYYIDIYEPLDNMIQSRQKYGFEDIDVGCCGSGYIEATYLCNKFSNMCPDRSKYLFWDSIHPTEKAYHQLFLAFQSTIDFIVNN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03993 366 Gene3D SGNH hydrolase 21 362 IPR036514 -
Tsu08g03993 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 363 - -
Tsu08g03993 366 Pfam GDSL-like Lipase/Acylhydrolase 36 354 IPR001087 GO:0016788
Tsu08g03993 366 SUPERFAMILY SGNH hydrolase 164 360 - -
Tsu08g03993 366 PANTHER GDSL ESTERASE/LIPASE EXL3 8 363 - -
Tsu08g03993 366 CDD SGNH_plant_lipase_like 35 356 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03993 Tsu-Chr8 58195811 58201469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03993 10 352 Pollen Coat Proteome AT1G75910 32.670 1.46e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03993 - - gmx:100812062 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03993 08 58195811 58201469 Tsu08g03993 08 58195811 58201469 ECH