Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03983 ATGTTTGACCACACCTTGGGACAGGGTACCTTAGCTCCAGAGAAGCTTAGTGCATTGAAGTCGAACAACAATATAGGAAAAGAGTCTAATGGTGTAGAAAATGGTATTCATAATGAAAATCTTGTGTCAGTCGAAACTATTGCTGCAACAAGAATCCAGACTGCATTCCGGGCTTATAAGGCAAGAAAAACTCTACGACGATTGAAAGGTTTCACAAAACTGAAGACTTTAACAGAAGGTTACTCTGTTCAAAAGCAAGCCAGTACAACTATAACATATCTTCATTCATGGAGCAAGATACAAGGTGAGATTAGAGCTCGTCGAATCTGTATGGTGACAGAAGACAAGATCAGGCGGAAGAAACAAGAGTCTCAACTAAAACTTGAGGGAAAGCTCCATGATTTTGAGGTCGAATGGTCTGGCGGTCCTGAAACCATGGAGGAGACACTTGGGAGAATACATCAAAAAGGAGAAGCAGCAGTGAAGCGAGAAAGAGCCATGGCTTACGCCTTTTCTCACCAGTGGAGGGCAAACTCTAGTCAGAGCCAAGCACTAGGTAGTTACGAGCTTGGCAAAGCTAACTGGGGTTGGAGCTGGAAGGAACGCTGGATCGCTGCTCGTCCATGGGAAAGCCGCGTTGCTAACATTAGCCCgaaaaaagttcaaaataagCAATCATTCAAGGTTCAAAAGGATAAAAACACATCGAAATCTAAAACTTCGGTTTCAGTTACACCTTCTCCCTCCAATGCAAAAGGGACTACTCCTAAAGCAAGTACCAAAGCTAGGAGATTGTCTTATCCAACCACAGAGAAAGAGAAAACTGTGGTACGAGGTtcacaaagattacaaactctacttcatcatcttcaatcaTCTTCCAATTCCATCTCCATAACTAATCCAATCGAACAAATTTCAAATTCCAAACCCAATAACAAGAAAGCTGctgttttgatttgtttattcGAAGGCCAAGATGGGAATTTGCGAGTAATTTTGACTCAGCGTGCTTCTTCTCTCTCAACACACCCCGGTGAGGTTGCTTTACCAGGTGGCAAAAGAGATGAAAGTGATGCTGATGATGTTCAAACTGCTTTGAGAGAAGCTAAAGAAGAGATTGGATTAGACCCTTCTCTTGTTACTGTTATTACTCTTCTTGAGCCCTTCCATACTaagTACGGCATCACAATAATACCAGTGGTTGGAATGCTGTCAAACAAGGATGCATTTTCACCAGTTTTAGATTCAGCTGAAGTTGAAGCAATATTTGATGTTCCCTTGGAGATGTTCCTCAAGAATGATAATAGAAGAGATGAGCAAAGAGAATGGGTGGGAGAGAAGCATCTTATACATTATTTTGATTATGAGGTAGAGAACAAAAAGTACGTGATATGGGCTATAACGGCTGCAATTTTAATTAGGGCTGCTACTCTTATACTTCAGCGGCCGCCAGCTTTTCTAGAGCAGAGGCCTAAAATATGGGGAGGAATTACTGAAAATGATACGATATTACTTCAGAGGAGTAATTCGCAattgtga 1542 0.3982 MFDHTLGQGTLAPEKLSALKSNNNIGKESNGVENGIHNENLVSVETIAATRIQTAFRAYKARKTLRRLKGFTKLKTLTEGYSVQKQASTTITYLHSWSKIQGEIRARRICMVTEDKIRRKKQESQLKLEGKLHDFEVEWSGGPETMEETLGRIHQKGEAAVKRERAMAYAFSHQWRANSSQSQALGSYELGKANWGWSWKERWIAARPWESRVANISPKKVQNKQSFKVQKDKNTSKSKTSVSVTPSPSNAKGTTPKASTKARRLSYPTTEKEKTVVRGSQRLQTLLHHLQSSSNSISITNPIEQISNSKPNNKKAAVLICLFEGQDGNLRVILTQRASSLSTHPGEVALPGGKRDESDADDVQTALREAKEEIGLDPSLVTVITLLEPFHTKYGITIIPVVGMLSNKDAFSPVLDSAEVEAIFDVPLEMFLKNDNRRDEQREWVGEKHLIHYFDYEVENKKYVIWAITAAILIRAATLILQRPPAFLEQRPKIWGGITENDTILLQRSNSQL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03983 513 MobiDBLite consensus disorder prediction 236 265 - -
Tsu08g03983 513 ProSiteProfiles IQ motif profile. 45 73 IPR000048 GO:0005515
Tsu08g03983 513 ProSiteProfiles Nudix hydrolase domain profile. 313 469 IPR000086 -
Tsu08g03983 513 CDD CoAse 314 474 IPR045121 GO:0010945
Tsu08g03983 513 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 311 502 - -
Tsu08g03983 513 SUPERFAMILY Nudix 315 473 IPR015797 -
Tsu08g03983 513 PANTHER NUDIX HYDROLASE 311 502 IPR045121 GO:0010945
Tsu08g03983 513 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 288 478 - -
Tsu08g03983 513 MobiDBLite consensus disorder prediction 221 278 - -
Tsu08g03983 513 Pfam NUDIX domain 315 441 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03983 Tsu-Chr8 58124083 58132480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03983 45 268 IQD Protein Family AT2G33990 57.589 6.98e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03983 - - vun:114186748 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03983 08 58124083 58132480 Tsu08g03983 08 58124083 58132480 ECH