Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03981 atgatgaaaaacaaAGAACAAACACTCATATTTCCTTCTTACACCCCCTTCACAGAAGACCACACCCTCCCTCTTTCCCACCTCGACACCGATCGCAACCTCCACTTAACCATCCGCTACCTCCGCGTTTACACCTCCACCACCGCCAACCACCACAACGACCCATTCCACGTCATCTCCACCTCCCTCTCACAAACACTCCCTCATTACTACGCACTCGCCGGAACACTTCGCCACCGTCAAAACCCGGACAACCGTCTCGAACTTTTCTGCACTCCCAACCAAACCATTCCTCTCATCCACGCCACAGTAGACATTACTCTCGAATCCATCAACTACCTCGATGAAAATCCATCTTCACATTTCATCGAACAGTTGGTGCCCAACCCAGAACCCGAAGAAGGAATGAAACATCCATGTATGATTCAACTAACAATTTTCAAATGCGGTGGATTCACTCTCGGTGCAGCGATTCATCACTCGCTATGTGATGGAATGGGTGGGACTATGTTTTTTAACTCGGTGGCTGAGTTGGCTCGTGGAGTGACTCGGATAACGGTGGAGCCAGTATGGGATAGAGAGAAGTTGTTGGGTCCGAGAGATGTGCCACGTGTTGATTCGGATTTGATAAGAGAGTTTTTGAGTTTGGATAAAGAGTTTTTGGTGTATAAAGAGGATATTGTGAGTGTGAGAGAGTGTTTTGATGTGAGGGATAAGTGTTTAGAAGAGTTTAAGAGATTATTGTTTGATCAATCTGGAGTTAAGTTTACCACTTTTGAAGCTTTAGGTGCTTACATTTGGAGATCCAAGATAAAGGCCTCACAAGTGGAGGATAATGAGAAGGTTAAATTTGCATACTCAATTAACATAAGAAGATTAATAAAGCCATCATTACCTGCTGGATATTGGGGAAATGGCTGTGTTCCAATGTATGTTCAACTAAGTGCCAAAGATTTGATAGAGCAACCAATTTGGAAAACAGCTGAACtaataaaaaagagtaaaacTAATGTTACTGATGAGTATGTTCGTTCCTTCATTGATTATCAGCATCTGCATTATGCTGATGGGATCACAGCAGGAAAATGGGTGAGTGGTTTCACTGATTGGAGACATTTGGGTCATTCTACTGTTGATTTTGGATGGGGTGGTCCTGTTACTGTTTTGCCACTTGGAAGATACTTACTTGGGAGTGTTGAACCTTGTTTCTTTTTGCCTTATTCTACAGCTTGTGCTGATAAAAAAGATGGGTTTAAGGTTTTGGTGAATTTGAATGAGGTAGCTTTGCCTGCTTTTAGAGAAGATATGCAAATGTTTGCTAGTAGTCAAGAGGTGTTGCCCGAGTCACGCATTTGA 1356 0.424 MMKNKEQTLIFPSYTPFTEDHTLPLSHLDTDRNLHLTIRYLRVYTSTTANHHNDPFHVISTSLSQTLPHYYALAGTLRHRQNPDNRLELFCTPNQTIPLIHATVDITLESINYLDENPSSHFIEQLVPNPEPEEGMKHPCMIQLTIFKCGGFTLGAAIHHSLCDGMGGTMFFNSVAELARGVTRITVEPVWDREKLLGPRDVPRVDSDLIREFLSLDKEFLVYKEDIVSVRECFDVRDKCLEEFKRLLFDQSGVKFTTFEALGAYIWRSKIKASQVEDNEKVKFAYSINIRRLIKPSLPAGYWGNGCVPMYVQLSAKDLIEQPIWKTAELIKKSKTNVTDEYVRSFIDYQHLHYADGITAGKWVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRYLLGSVEPCFFLPYSTACADKKDGFKVLVNLNEVALPAFREDMQMFASSQEVLPESRI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03981 451 Pfam Transferase family 5 437 - -
Tsu08g03981 451 Gene3D - 225 436 IPR023213 -
Tsu08g03981 451 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 3 441 - -
Tsu08g03981 451 Gene3D - 2 213 IPR023213 -
Tsu08g03981 451 PANTHER ACYL TRANSFERASE 4 3 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03981 Tsu-Chr8 58117391 58119563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03981 44 392 Monolignol Biosynthesis Gene Families AT5G48930 28.571 4.65e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03981 - - gmx:100817021 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03981 08 58117391 58119563 Tsu08g03981 08 58117391 58119563 ECH