Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03952 ATGGCTTCCTCTAACCAAAACTTCATCTACATCGCCAAACTCGCTGAACAAGCCGAACGCTACGAagAAATGGTTGATGCGATGAAGAATGTTGCTAAGCTTGATGTTGAATTGACTGTTGAAGAAAGAAATCTGTTATCAGTTGCTTATAAGAATGTTGTTGGAGCACGTAGGGCTTCTTGGAGGATTCTTTCCTCTAttgaacaaaaagaagattCCAAAGGGAATGAGGCAAATGTGAATCGGATTAAAGAGTATAGGAAAAAAGTTGAATCTGAGTTATCTGATATTTGTACTGATATCATGACTGTTATTGATACTCATCTTATTCCTCATTCTTCTGGTGAATCTAATGTGTTTTACTACAAAATGAAAGGTGACTATTACCGTTATCTCGCTGAGTTTAAGAGTGGAGATGACAGGAAAGAGGCTGCTGATCAGTCACTGAAAGCATATCAAGAAGCTTCTACTGCTGCGGAGACTGAGTTACCTCCCACACATCCCGTTAGACTGGGTTTGGCTTTGAACTTCTCTGTCTtctattatgaaatcttgaacTCTCCAGAAAGGGCTTGTCACCTTGCCAAGCAGGCATTTGATGTAGCAATCTCTGAGTTGGATTCCCTCAACGAGGAATCTTACAAAGACAGCACACTGATCATGCAGCTTTTGAGGGACAACCTCACATTGTGGACTTCTGACATTCCTGAGGATGGAGCTGATGAACAAAAGACGGAGTCTGCTCGTGCCCCTGCAGGAGATAATGCAGAGTAA 774 0.4031 MASSNQNFIYIAKLAEQAERYEEMVDAMKNVAKLDVELTVEERNLLSVAYKNVVGARRASWRILSSIEQKEDSKGNEANVNRIKEYRKKVESELSDICTDIMTVIDTHLIPHSSGESNVFYYKMKGDYYRYLAEFKSGDDRKEAADQSLKAYQEASTAAETELPPTHPVRLGLALNFSVFYYEILNSPERACHLAKQAFDVAISELDSLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGADEQKTESARAPAGDNAE 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03952 257 ProSitePatterns 14-3-3 proteins signature 2. 214 233 IPR023409 -
Tsu08g03952 257 PRINTS 14-3-3 protein zeta signature 178 204 IPR000308 -
Tsu08g03952 257 PRINTS 14-3-3 protein zeta signature 151 177 IPR000308 -
Tsu08g03952 257 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Tsu08g03952 257 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Tsu08g03952 257 PRINTS 14-3-3 protein zeta signature 205 234 IPR000308 -
Tsu08g03952 257 PRINTS 14-3-3 protein zeta signature 116 138 IPR000308 -
Tsu08g03952 257 PANTHER 14-3-3 PROTEIN 4 244 IPR000308 -
Tsu08g03952 257 SMART 1433_4 5 245 IPR023410 -
Tsu08g03952 257 Coils Coil 11 31 - -
Tsu08g03952 257 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Tsu08g03952 257 MobiDBLite consensus disorder prediction 235 257 - -
Tsu08g03952 257 PIRSF 14-3-3 1 246 IPR000308 -
Tsu08g03952 257 Pfam 14-3-3 protein 12 232 IPR023410 -
Tsu08g03952 257 SUPERFAMILY 14-3-3 protein 6 234 IPR036815 -
Tsu08g03952 257 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 4 244 - -
Tsu08g03952 257 Gene3D - 1 246 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03952 Tsu-Chr8 57819900 57823249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03952 8 257 14-3-3 family AT2G42590 77.165 3.07e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03952 K06630 - gmx:100807980 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03952 08 57819900 57823249 Tsu08g03952 08 57819900 57823249 ECH