Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03935 ATGGGAATGAGATGTGACacatttaaattttggtttagAATTTATATTTGCTTCATTACTCTTTGGGGAATTCATGGGTGTTTATCGCTTAATGATGAAGGAATGGCTTTGTTGGAATTTCGTGCAAGAGTAACATGTGATCCTCATGCTGCTTTGGAAAATTGGGATCCAAATGATTGTGACCCTTGCAATTGGGTTGGGGTCCATTGTGTCGATGGTAAAGTGCAGATGCTGGATCTAAATGGACTATCCTTAGAAGGGACATTGGCTCCAGAACTTGGGAGACTTAGTCACTTAAAATCTCTTGTGTTATGCAATAATAACTTTTCTGGTGACATTCCTAAAGAACTTGGAGATCTAGTTGAGTTAGAGTTATTGGATTTAAGGGAAAATAACTTGTCAATAAGCATCCCAACAGAACTTAGTAGGATGTTATCCCTAAAACACTTcttatatgataaacactttattaagttgtttatccaaacaggcctAAATGATCTAGTTTTGCGACAGTTTCATCATAGCATAATTGTACTAAATTTTTCTACTTTTGTTTGTAGGTTCAAGCAAGGCCAAGAAGAGAAATGTTTCGACCTTCAGCCTCGTACTAATGAAGCAGAGATTGAGATGAATGTGCCGAATCTTGTAAATTACGCGCGTCGTAGGTTACTTGATCAATCCAGTAACCTTGCAGCTCTACCTTATAATGGTGAACAAACAACAGATTTCAGTTATATTCCAATTAGCTTTAGTAGTGGATCTTTTTCAGCTGTTCCAGATGCAACTAAGAAACAAAATCAGTCACAAACACCACCATTGCCTTCTTCTCCTCCTTCTGAGCCTTCGCCTCCTTCCGAACCTTTACAAGCCGGAAAGCAAACAAGTGAAGAACAACCGAAAACTTATGGATATTTGTGGGAGTATATACTTATCATCTTAGTCGCGGTTGTATTGGTCATTGTGATCATAGTCCTTCTTTGCATTTGTAGAAAACCAGCAGCTAAAATAATTAAGCCTTGGAATACAGGCATAAGTGGACAGTTGCAAAAAGCTTTTGTAACAGGGGTTCCGAAGTTGAATAGAGCAGAACTAGAGACAGCTTGTGAAGATTTCAGCAATATTGTTACTAATTTAGAAGCATGCACTGTATTCAAAGGAACATTGTCTAGTGGAGTTGAAATTGCAGTTGTTTCTACTCTTATTAATTCTTCTCATGATTGGTCTAAGAACATGGAATTGAACTACAGAAGAAAGATTGCCACATTGTCTCGGATTAACCATAAGAACTTTGTTAATCTTATTGGATACTGTGAGGAACAAGAACCATTCTCAAGGATGTTTATATTAGAATATGCCCCAAATGGAAGTCTATTTGATTATCTACATGTTAAAGAAATTGGATGTCTTGAATGGAATGAAAGGATAAGGATCATAATGGGAACTGCTTATTGTCTTCAATACATGCACCATGATTTAAATCCACCAATAGCTCATACCAAAGTTAATTCAAGGTTGATCATGTTGACAGATGATTATGCTGCAAAgCTCTGTGAGGTCACTTTTAGTAGTATTATAGAACCAGCTAAGGCAACTACTAGAGGCGACTCAAAGAAATCTGAGATGACGCGTGCTGGTCTCGACAACAATGTCTATGAATTTGGAGTATTATTGCTTGAAATCATTTCTGGGAAATTGCCTCATTCTGAAGAACAAGGAAATATTGTCAACTGGGCTGCTGATTACATAAATGACAAGAGAAGCATATGTTATATGGTTGATCCAAGTTTGAAGTCATTCAAGGAAAATGAACTTGATGTAGTTTGTGAAGTGATTCAATCATGTATCCAACCTGATCCAAAGTTAAGGCCTACAATGAGAGacataacttcaaaattaaggGAAGTTATTACTGTGACACCTGAACAAGCTGTTCCAAGACTTTCTCCACTATGGTGGGCTGAACTTGAGATATTATCAGTGGAGGCTACTTAA 1995 0.3599 MGMRCDTFKFWFRIYICFITLWGIHGCLSLNDEGMALLEFRARVTCDPHAALENWDPNDCDPCNWVGVHCVDGKVQMLDLNGLSLEGTLAPELGRLSHLKSLVLCNNNFSGDIPKELGDLVELELLDLRENNLSISIPTELSRMLSLKHFLYDKHFIKLFIQTGLNDLVLRQFHHSIIVLNFSTFVCRFKQGQEEKCFDLQPRTNEAEIEMNVPNLVNYARRRLLDQSSNLAALPYNGEQTTDFSYIPISFSSGSFSAVPDATKKQNQSQTPPLPSSPPSEPSPPSEPLQAGKQTSEEQPKTYGYLWEYILIILVAVVLVIVIIVLLCICRKPAAKIIKPWNTGISGQLQKAFVTGVPKLNRAELETACEDFSNIVTNLEACTVFKGTLSSGVEIAVVSTLINSSHDWSKNMELNYRRKIATLSRINHKNFVNLIGYCEEQEPFSRMFILEYAPNGSLFDYLHVKEIGCLEWNERIRIIMGTAYCLQYMHHDLNPPIAHTKVNSRLIMLTDDYAAKLCEVTFSSIIEPAKATTRGDSKKSEMTRAGLDNNVYEFGVLLLEIISGKLPHSEEQGNIVNWAADYINDKRSICYMVDPSLKSFKENELDVVCEVIQSCIQPDPKLRPTMRDITSKLREVITVTPEQAVPRLSPLWWAELEILSVEAT 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03935 664 SUPERFAMILY L domain-like 31 158 - -
Tsu08g03935 664 ProSiteProfiles Protein kinase domain profile. 335 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03935 664 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Tsu08g03935 664 PANTHER LRR RECEPTOR-LIKE KINASE 1 664 - -
Tsu08g03935 664 MobiDBLite consensus disorder prediction 258 296 - -
Tsu08g03935 664 Gene3D Phosphorylase Kinase; domain 1 346 452 - -
Tsu08g03935 664 SUPERFAMILY Protein kinase-like (PK-like) 382 633 IPR011009 -
Tsu08g03935 664 MobiDBLite consensus disorder prediction 272 286 - -
Tsu08g03935 664 Pfam Protein tyrosine and serine/threonine kinase 383 633 IPR001245 GO:0004672|GO:0006468
Tsu08g03935 664 Gene3D Transferase(Phosphotransferase) domain 1 453 645 - -
Tsu08g03935 664 Gene3D Ribonuclease Inhibitor 33 149 IPR032675 -
Tsu08g03935 664 PANTHER PROTEIN MALE DISCOVERER 2 1 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03935 Tsu-Chr8 57671674 57676499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03935 27 636 Receptor kinase-like Gene Family AT2G42290 24.925 1.35e-43 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Tsu08g03935 PK_Tyr_Ser-Thr 3.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03935 - - lang:109337921 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03935 08 57671674 57676499 Tsu08g03935 08 57671674 57676499 ECH