Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03934 ATGAAGAACCCTGTTGTTGAAAAGTTCTCTGAATTCTATCAGAAATGGGTTTTCAAGCTTGAAGAAATTCACCATGAGCTTATAgaagtatcaaagaaaaaaacagagTTGGTAATGAATGAACAAGAATTACAAACACTAGTTTCAAAAGTCACAACTCATTTGAAAGAATATTACACTGTCAAATGGGGTGCAGCACATGAAGATGttgttgtgtttttcacaccaaCATGGCTTAGTCCTTTGGAAAATGCTTACCTTTGGGTAACCGGTTGGAAACCTTCCTCAATTTTTCGCATGCTCCAGAGGTTTGACATAACAGATGAACAGAGAAAAGAGATAGAGAAATTGAGAGTGAGGATAAAGATGGAGGAAGAGAAAGTGgagagagagatggagagacAACAAGTAGCTATGGCTGATTTGAAGATAGTCGAGCTGGCAAAGCTTTCGTGTAGAGCAATGAAAGGTGATGCTAAGGTTGATGGGTTGGTTGGTGTAGCTTTGAAAGGTGTTTTTGCTGGTTTGGAGAAAGTTATGAAAACTTCTGATTGTGCTAGACTTAAGACACTTAAAGGAGTTTTGGATGTTTTAAGTCCAATTCAGTGTGTTGATTTTTTAGCTGCACATATTGGTATGCAGTTGAGATTGAGGCAATTTGGGATGAAGATGATTACTGGATCCAATTGA 690 0.3449 MKNPVVEKFSEFYQKWVFKLEEIHHELIEVSKKKTELVMNEQELQTLVSKVTTHLKEYYTVKWGAAHEDVVVFFTPTWLSPLENAYLWVTGWKPSSIFRMLQRFDITDEQRKEIEKLRVRIKMEEEKVEREMERQQVAMADLKIVELAKLSCRAMKGDAKVDGLVGVALKGVFAGLEKVMKTSDCARLKTLKGVLDVLSPIQCVDFLAAHIGMQLRLRQFGMKMITGSN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03934 229 ProSiteProfiles DOG1 domain profile. 6 227 IPR025422 GO:0006351|GO:0043565
Tsu08g03934 229 Pfam Seed dormancy control 34 102 IPR025422 GO:0006351|GO:0043565
Tsu08g03934 229 PANTHER - 1 224 - -
Tsu08g03934 229 Coils Coil 107 145 - -
Tsu08g03934 229 PANTHER PROTEIN DOG1-LIKE 4 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03934 Tsu-Chr8 57668042 57668731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03934 13 218 bZIP Transcription Factor Family AT5G06960 25.481 1.92e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03934 - - gmx:100808459 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03934 08 57668042 57668731 Tsu08g03934 08 57668042 57668731 ECH