Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03933 ATGGAGAATAAAGGAACAATTCTGATGAATAAGTATGAGGTAGGACGCATGCTTGGCCAAGGAAACTTCGCGAAAGTTTACCATGCAAGGAACTTAAAGACAGGACAAAATGTTGCCATCAAAGTGTTTAACAAAGAAATGATCATGAGAGTCGGCATGAAGGAACAAATGAAGCGCGAAATCTCAGTGATGCGTCTCGTTAGACACCCCAACATTGTCGAATTCTATGATGTCATGGCAAGcaaaaataagatatatttcGCTATGGAACACGTGAAAGGCGGTGAGCTTTTCAATAAAGTGTCTCGAGGGAAGCTGAGGGAAGATATGGCTAGAAAATATTTTCAACAACTTATTGAAGCTGTTAATCATTGTCACAAAAGAGGGGTTTATCACCGTGATCTTAAACCGGAAAATCTTCTCCTCGATGAAAATGGTGATCTCAAAGTTTCGGATTTCGGTCTTAGTGCAATGTTGGAATCAAAAAAGAAGGATGGTCTTCTTCATACAACATGTGGTACTCCAGCTTATGTAGCACCTGAAGTTATCAAGCAAAAAGGTTATGATGGAGCCGTGGCAGATATTTGGTCTTGTGGTGTTATTCTCTATGTTCTATTAGCTGGTTATCTTCCTTTCAATGataaaaatctaatggaaatgTATAAGAAGATTGCAAAAGCAGAATTCAAGTTTCCGCAATGGTTTCGTTCTGATGCGAAAAGGCTTATTTATAGAATTCTTGATCCTGATCCAAGAACAAGAATTACTATTAACAATATAATGCAAGATAGTTGGTTTAAAAAAGGGTATAAGCAAATTGAAGGACCAAAATTACCACCTATATGGCCTGCGCGCGGCGATGTCTCAGATGTTCATGATACATTTGATGATTTATCATCACTATCAAGTTCAAATGAACTTTCAAGTCCAATGTCTATTAAAAATCATGAACAATATGCTATGAAGCCATATTGTTTCAATGCATTTGATATCATATCACTAACTTCAGGATTTGATCTTTCTGGTTTGTTTGAGAAAGATATGAATGAAAGACAACATGCAAGATTTGCTACAAAAAGACCACCTTCAACAGTTGTGTCGAAACTCGAAGAAATAGCACAATTAGATGGTAGATTTAAGGTCATGAAACAAAATGGGATTATAAGATTGGAAGGAAATGAGAAAGGGATAAATGAACAACTTAGTATAGATACAGAAATCTATGAAGTTGCTTCATCAGTTTATATTGTTGAGGTGAACAAAATTGCTGGAGACATGTTGGAATATAGGAATTTTTGGAACCAATCCTTAAAGCCTTCTCTTAATGAAATTGTTTGGGTTTGGCAAGAATATGAGTAG 1359 0.3554 MENKGTILMNKYEVGRMLGQGNFAKVYHARNLKTGQNVAIKVFNKEMIMRVGMKEQMKREISVMRLVRHPNIVEFYDVMASKNKIYFAMEHVKGGELFNKVSRGKLREDMARKYFQQLIEAVNHCHKRGVYHRDLKPENLLLDENGDLKVSDFGLSAMLESKKKDGLLHTTCGTPAYVAPEVIKQKGYDGAVADIWSCGVILYVLLAGYLPFNDKNLMEMYKKIAKAEFKFPQWFRSDAKRLIYRILDPDPRTRITINNIMQDSWFKKGYKQIEGPKLPPIWPARGDVSDVHDTFDDLSSLSSSNELSSPMSIKNHEQYAMKPYCFNAFDIISLTSGFDLSGLFEKDMNERQHARFATKRPPSTVVSKLEEIAQLDGRFKVMKQNGIIRLEGNEKGINEQLSIDTEIYEVASSVYIVEVNKIAGDMLEYRNFWNQSLKPSLNEIVWVWQEYE 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03933 452 Pfam NAF domain 324 383 IPR004041 GO:0007165
Tsu08g03933 452 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03933 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Tsu08g03933 452 PANTHER - 2 452 - -
Tsu08g03933 452 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 452 - -
Tsu08g03933 452 Gene3D Kinase associated domain 1, KA1 322 447 - -
Tsu08g03933 452 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03933 452 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03933 452 ProSiteProfiles NAF domain profile. 321 345 IPR018451 GO:0007165
Tsu08g03933 452 Gene3D Transferase(Phosphotransferase) domain 1 3 321 - -
Tsu08g03933 452 SUPERFAMILY Protein kinase-like (PK-like) 8 320 IPR011009 -
Tsu08g03933 452 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Tsu08g03933 452 CDD CIPK_C 327 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03933 Tsu-Chr8 57663248 57664646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03933 1 449 CBL-interacting serine-threonine protein kinases AT5G45820 58.667 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu08g03933 Pkinase 1.6e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03933 K07198 - gmx:100807927 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03933 08 57663248 57664646 Tsu08g03933 08 57663248 57664646 ECH