Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03931 ATGGCTGACGTTCTTTCACAAAAGATCAAAACACCCACAAGCAACAACAAGAAGGAAACATCGAATCTTTTACTGGGTCGATTCGAAATTGGGAAACTTCTTGGTCATGGAACATTTGCTAAGGTTTATTATGCAAAGAATATCAAAACTGGTGAAGGGGTTGCTATCAAAGTCATTGATAAGGAGAAGATTCTGAAAGGTGGTTTAGTTGCTCATATTAAACGTGAGATCTCGATTCTTCGGCGTGTTCGACACCCGAATATCGTTCAATTGTTTGAGGTAATGGCTACTAAAACAAAGATCTATTTTGTTATGGAATATGTTCGTGGGGGTGAACTTTTTAATAAGGTTGCTAAGGGTAGATTGAAAGAAGAAGTTGCTAGAAAATATTTTCAACAATTGATTTCAGCTGTTGGCTTTTGTCATGCTAGAGGTGTTTATCATAGGGATCTAAAACCTGAAAATTTGTTGCTTGATGAGAATGGTAATTTGAAAGTTTCTGATTTTGGTTTAAGTGCTGTTTCTGATCAAATTAGACAAGATGGTTTGTTTCATACTTTTTGTGGTACACCTGCTTATGTTGCTCCTGAGGTTTTGGCTAGGAAAGGTTATGATGGTGCTAAGGTTGATCTTTGGTCTTGtggtgttgttttgtttgttttaatggCTGGTTATTTACCTTTTCATGATCAAAATGTTATGGCAATGTATAAGAAGATTTATAAGGGTGATTTTAGGTGTCCTAGGTGGTTTTCGCCTGATTTGGCTAAACTCCTTATTCGTCTCCTTGATACGAAGCCTGAAACTAGGATTGCTATTCCTGATATTATGGAGAATAGGTGGTTTAAAAAAGGGTTCaaacaaattaagttttatgttgAAGATGATAGGCTTTGTAATGTTGATGATAATTTAGCTGACATGGATGATGATACAGCTTCTATAGCATCTGTGGCGTCTGTGGCGTCTTTCTCTGATTATTCGATTTCGGAATCTGATTCTGAGGTTGAGACTCGAAGGAAAAATGCTCCTTTGCCAAGACCTGCTAGTTTGAATGCTTTTGATATTATTTCGTTTTCTCCTGGTTTTGATCTTTCTGGATTGTTTGAGGAAAAAGGTGACGAGAATAGGTTTGTGACTGCTGCACCGGTTTCGAAGATCATATCGAAATTGGAAGAGATTGCTAATTTGGTTAGGTTTACTGTAAGGAAGAAGGATTGCCGGGTTAGCTTGGAGGGTACAAGAGAAGGTGTGAAGGGACCCTTGACTATTGCTGCTGAGATATTTGAGCTAACACCTACTTTGGTTGTCGTTGAGGTGAAGAAGAAAGGAGGCGACAGAGCGGAATATGAGAGATTTTGCAATGAAGAATTGAAGCCTGGATTGCAGAATTTGATGGCGGATGAATCAGCAACTTCTTCAGATTTGCCAAGGCCGAAAGAGCCTACCTTACTTCGCGTGCTTTCTGAACCAGTTCACAACTTGACTTCGGATATCGAATCGCCGCACTATGTACCTGAAGAGTGA 1527 0.3811 MADVLSQKIKTPTSNNKKETSNLLLGRFEIGKLLGHGTFAKVYYAKNIKTGEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYKGDFRCPRWFSPDLAKLLIRLLDTKPETRIAIPDIMENRWFKKGFKQIKFYVEDDRLCNVDDNLADMDDDTASIASVASVASFSDYSISESDSEVETRRKNAPLPRPASLNAFDIISFSPGFDLSGLFEEKGDENRFVTAAPVSKIISKLEEIANLVRFTVRKKDCRVSLEGTREGVKGPLTIAAEIFELTPTLVVVEVKKKGGDRAEYERFCNEELKPGLQNLMADESATSSDLPRPKEPTLLRVLSEPVHNLTSDIESPHYVPEE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03931 508 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 19 1 472 - -
Tsu08g03931 508 CDD CIPK_C 352 463 - -
Tsu08g03931 508 PANTHER - 1 472 - -
Tsu08g03931 508 ProSiteProfiles NAF domain profile. 346 370 IPR018451 GO:0007165
Tsu08g03931 508 Gene3D Transferase(Phosphotransferase) domain 1 17 342 - -
Tsu08g03931 508 ProSiteProfiles Protein kinase domain profile. 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03931 508 SUPERFAMILY Protein kinase-like (PK-like) 24 283 IPR011009 -
Tsu08g03931 508 Pfam NAF domain 348 404 IPR004041 GO:0007165
Tsu08g03931 508 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Tsu08g03931 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Tsu08g03931 508 Gene3D Kinase associated domain 1, KA1 346 467 - -
Tsu08g03931 508 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03931 508 CDD STKc_SnRK3 27 281 - -
Tsu08g03931 508 SMART serkin_6 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03931 Tsu-Chr8 57639784 57641884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03931 5 469 CBL-interacting serine-threonine protein kinases AT4G18700 78.846 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu08g03931 Pkinase 3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03931 - - gmx:100814720 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03931 08 57639784 57641884 Tsu08g03931 08 57639784 57641884 ECH