Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03894 ATGAAGAGTTGTGAAGAATGGAAACCTTTTATGATAATGATAGCAATTgatatttcttttgctgttgTGAATATTCTTCTCAAGAAAGTCCTTGATGAAGGAATGAACCATTTGGTTTTTATCACTTACCGTCTTTCGATTGCTACCATTTTCGTCGGCTCAATCGGTTACTTTAGAGAAAGaAATAGTAGACCGCCGCTCACATTTCGAATTTTATGTTACCTCTTCTTCAGTGCCATTGTTGGAGCATCAGTTACACAATATTTCTTCCTCCTAGGGATTCAATATACTTCTGCTACATTTGCTTGTGCCTTTGTCAACATGGTTCCTGTGATCACTTTCCTATTAGCATTGCCATTTGGATTAGAGACAGTGAACATCAAATGCAACAGTGGAAGAGCAAAGATTCTTGGTACATTGGTGTGTATAGTTGGTGCATTGATGTTAACACTTTACAAAGGAAAGGGTCTGTTTACTTTTTCTCACCATCAATCTTCAGTGAAGTTAACATCTACTAGGACACCAGAAAAATGGACTATTGGTGTAACAGCTTTGATTTTGGGAACTCTTTTTTGGTCTTCTTGGTTCATTTTACAATCTAAAATAAGCAAAAGATATCCATGTCAGTATTCTAGTACAGCAATTATGAGCTTCTTTGGTGCCATTCAATCAGCTGTTATTTGCTTCTTCATTGACCATAACTTGTCTATATGGGTTCTCAGAGGAAAGATTCAAATAATTGCAATTTTGTATGCTGGAATAATTGGATCAGGATTGTGTTTTGTTGGTATGTCATGGTGTGTGAAGAAAAGGGGTCCAGTCTTTACTGCAGCATTTAGCCCTTTTGTTCAAATAATGGCTGCCATGATTGATATCCCTGTCTTGCATGAACAGCTCTATCTTGGAAATGTGTTGGGATCCATCTTGGTGATGATTGGATTATACATTCTTCTATGGGGTAAGAACAAAGAGATGAAGAATCGTTTGATAAAGTTAGGGGAGGAAGCTGAAAAAAACAAGGAACAAGAGCCACAACCTCAAATACAACACTTAACTGTGTCTTGTGAATCAAGGTGTCAATAA 1083 0.3647 MKSCEEWKPFMIMIAIDISFAVVNILLKKVLDEGMNHLVFITYRLSIATIFVGSIGYFRERNSRPPLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVITFLLALPFGLETVNIKCNSGRAKILGTLVCIVGALMLTLYKGKGLFTFSHHQSSVKLTSTRTPEKWTIGVTALILGTLFWSSWFILQSKISKRYPCQYSSTAIMSFFGAIQSAVICFFIDHNLSIWVLRGKIQIIAILYAGIIGSGLCFVGMSWCVKKRGPVFTAAFSPFVQIMAAMIDIPVLHEQLYLGNVLGSILVMIGLYILLWGKNKEMKNRLIKLGEEAEKNKEQEPQPQIQHLTVSCESRCQ 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03894 360 PANTHER WAT1-RELATED PROTEIN 9 339 IPR030184 GO:0016021|GO:0022857
Tsu08g03894 360 Pfam EamA-like transporter family 180 318 IPR000620 GO:0016020|GO:0016021
Tsu08g03894 360 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
Tsu08g03894 360 PANTHER WAT1-RELATED PROTEIN 9 339 - -
Tsu08g03894 360 Coils Coil 322 342 - -
Tsu08g03894 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 154 - -
Tsu08g03894 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03894 Tsu-Chr8 57282607 57286190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03894 7 252 Nodulin-like Gene Family AT3G30340 51.984 1.54e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03894 - - gmx:100803670 599.356