Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03865 ATGTTTCAGGTTAAGGCCACAATGGGAGATACTCATTTGGGTGGTGTTGATTTTGATAACAATTTGGTGAACTGTCTTGTTCAATTGTTTCATCGAAAGTACAAGAATGATTTGAACAACAGCGAGAATTCCAAAGCTTTGGGGAGAGCTTTGGTTGAGGAAATAAACAAGGACTTGTTCAAAAAGTGCATGGAGATTGTTGAAAAGCTTTGCTCTGCTGCACCTGCTTCTCAATATCGTCCCAACCTTTCTCGTTTCGCCCCTTCCAAATCATCCAAATCTGCATCGTGA 291 0.4089 MFQVKATMGDTHLGGVDFDNNLVNCLVQLFHRKYKNDLNNSENSKALGRALVEEINKDLFKKCMEIVEKLCSAAPASQYRPNLSRFAPSKSSKSAS 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03865 96 Pfam Hsp70 protein 2 43 IPR013126 GO:0005524|GO:0140662
Tsu08g03865 96 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 47 71 - -
Tsu08g03865 96 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 1 49 - -
Tsu08g03865 96 SUPERFAMILY Actin-like ATPase domain 2 77 IPR043129 -
Tsu08g03865 96 Gene3D - 2 13 - -
Tsu08g03865 96 PANTHER HEAT SHOCK PROTEIN 70KDA 47 71 IPR013126 GO:0005524|GO:0140662
Tsu08g03865 96 PANTHER HEAT SHOCK PROTEIN 70KDA 1 49 IPR013126 GO:0005524|GO:0140662
Tsu08g03865 96 Gene3D Actin; Chain A, domain 4 14 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03865 Tsu-Chr8 56988478 56989179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03865 1 69 Calmodulin-binding Proteins AT5G02500 40.385 6.41e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03865 K03283 - mtr:MTR_2g017710 85.8853