Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03838 ATGGCAATGACCAACATCATCATTTCCACAACATGCTTGTTCCTCCTTCTCCTTGttcttccattggtttcatgcACCAAAAATACTCAGGTTTATCTAATTGAGTTTGGAGAACACATTAATGGAGAAAAAACATTGCATGAAATAGAGAAAACACATCACTCTTATTTGCTTTTGGTAAAAGAAACTGAGGAAAAAGCAAGAGCTTCTCTTCTTTATAGTTACAAACATACTTTCAATGGCTTTGCAGCTTTGCTTACACCAAATGAAGCCAATAATCTCTCAGGAATGGAAGGGGTGGTGTCTGTGACTAAGAGCCAAACAAAGATCTATTCATTGCATACCACAAGATCATGGAAATTTGTGGGGTTAGATGGGCCATTAGAACCTTTTGAAGAAAAATCCAATGAGACAAATAGTGGTTTCTTAGCCAAAGCAAAATATGGTCAAGATATTATAGTAGGAATGATTGATAATGGTGTATGGCCAGATTCAAAGAGTTTCAGTGATGAAGGTATGGGTCCTGTTCCACAGAAATGGAAAGGAGTGTGCCAAAATGGAACTgattttggttcatctaattgCAATAGAAAGATAATTGGGGCACGGTACTACTTGCAAGGTTACGAAAGTCTCTATGGCCCTCTAAACGAACAAGAGGATTACAAATCAGCTCGGGACAAAGATGGACACGGAACACACACAGCTTCAATAGTAGCAGGGCGAGCAGTTCAGAATGCCTCAGCACTCGGAGGCTTCGCCAGTGGTACAGCCATTGGTGGAGCCCCGTTAGCTCGCCTTGCCATATACAAAGCATGTTGGCCAATTAAAGGAAAACCAAAAAGCGATGGAAATGTTTGCACAAACATTGACATGCTTAAAGCTATAGATGATGCAATTGAAGATGGTGTTGATGTTTTAAACCTTTCCATTGGGTTCCATAATCCATTGAAATATGAAGATGATGTTATTGCTAAGGGTGCATTACAAGCTATAAGGAAAAATATTGTTGTGGTTTGTAGTGCTGGAAATTCTGGTCCTGTTGCTTCTAGTTTGTCGAATCCTGCTCCTTGGATCATCACCGTCGGTGCTAGTACCGTTGATCGAGCCTTTCTTGCTCCAATTAAACTTGCCAATGGCACATACATTGCGGGTAGATCAATTACTCCACTCTACATGGAAAACAGTTTACGCCCCTTAGTTCTAGCTAGTGATGTTGAACTTTCAGGCATTACTGCAAATTCTTCAGGGTATTGCCTAGACAATACCCTTGATCCAAGCAAGGTGAAGGGAAAGATAGTTTTGTGCATGAGAGGACAAGGTGGAAGAGTGATAAAAGGATTGGAAGCTCAAAGAGCTGGTGCTATAGGTTTTATACTTGGGAACAATAAAGCTTATGCAAATGATGTACCTTCTGATCCTAATTTCATTCCAGCTACTACAGTGACCTATGAGAATACCTTAAAACTTATTCAATATATTCATTCTACCCCTAATCCAATGGCACAACTTTTGCCTGGAAGAACAGTGTTAGATGCCAAACCAGCACCTTCCATGGCACTTTTCTCTAGCAGAGGTCCCAATATAATTGACCCTAATATTCTAAAGCCTGACATAACAGCTCCTGGAGTAGACATATTGGCAGCATGGACAGCCGAAGATGGACCTACAAGAATAACATTTCAGGATAAACGAGTTGTAAAGTACAATATCTTTTCAGGAACTTCAATGTCTTGCCCTCATGTTTCTGCTGCAGCTGTTCTTCTCAAAGCCAGGTACCCCACTTGGAGTCCTGCTGCTATTAGGTCTGCCCTCATGACTTCAGCAAGATCAACAGACAACACAGGAAATCAAATGACAGATGAAACAGGAAAATCTACAACACCATTTGCAATGGGATCAGGCCATTTCAATCCCAAAGGAGCATCAAATCCAGGACTCATTTATGATGCATCCTACAATGACTACCTTCTTTACCTTTGTAATCTTAATTCAACAAACATTGCATATAACTGTCCAAACCAAAATCCTGAACCATTTGATCTCAACTATCCATCAATACAAATCAATAAACTCAATCACACAAAAACTATAAAGAGAACAGTAACCAATGTTGGTAAGAGCAAAagtgtttacaaatttattgcTAATCCACCAAAGGAATTTACCATTATAGCCTTTCCAAGTGTTCTGAAATTTACACATGTTGGTCAGAAAAGGAATTTTGTCATCACAGTGAATAGAGATAAGTACTTACCAAGTAAAAGTGATTCTGAGAAGTACTATTTTGGATGGTATACTTGGACTGACAAACATCATGTTGTGAGAAGTCCAGTGGCAGTGTCTTTTCAGTAA 2355 0.3868 MAMTNIIISTTCLFLLLLVLPLVSCTKNTQVYLIEFGEHINGEKTLHEIEKTHHSYLLLVKETEEKARASLLYSYKHTFNGFAALLTPNEANNLSGMEGVVSVTKSQTKIYSLHTTRSWKFVGLDGPLEPFEEKSNETNSGFLAKAKYGQDIIVGMIDNGVWPDSKSFSDEGMGPVPQKWKGVCQNGTDFGSSNCNRKIIGARYYLQGYESLYGPLNEQEDYKSARDKDGHGTHTASIVAGRAVQNASALGGFASGTAIGGAPLARLAIYKACWPIKGKPKSDGNVCTNIDMLKAIDDAIEDGVDVLNLSIGFHNPLKYEDDVIAKGALQAIRKNIVVVCSAGNSGPVASSLSNPAPWIITVGASTVDRAFLAPIKLANGTYIAGRSITPLYMENSLRPLVLASDVELSGITANSSGYCLDNTLDPSKVKGKIVLCMRGQGGRVIKGLEAQRAGAIGFILGNNKAYANDVPSDPNFIPATTVTYENTLKLIQYIHSTPNPMAQLLPGRTVLDAKPAPSMALFSSRGPNIIDPNILKPDITAPGVDILAAWTAEDGPTRITFQDKRVVKYNIFSGTSMSCPHVSAAAVLLKARYPTWSPAAIRSALMTSARSTDNTGNQMTDETGKSTTPFAMGSGHFNPKGASNPGLIYDASYNDYLLYLCNLNSTNIAYNCPNQNPEPFDLNYPSIQINKLNHTKTIKRTVTNVGKSKSVYKFIANPPKEFTIIAFPSVLKFTHVGQKRNFVITVNRDKYLPSKSDSEKYYFGWYTWTDKHHVVRSPVAVSFQ 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03838 784 SUPERFAMILY PA domain 426 495 IPR046450 -
Tsu08g03838 784 SUPERFAMILY Subtilisin-like 146 644 IPR036852 GO:0004252|GO:0006508
Tsu08g03838 784 CDD PA_subtilisin_like 375 502 - -
Tsu08g03838 784 Gene3D - 368 511 - -
Tsu08g03838 784 Pfam Fibronectin type-III domain 681 781 IPR041469 -
Tsu08g03838 784 Pfam PA domain 418 488 IPR003137 -
Tsu08g03838 784 ProSiteProfiles Serine proteases, subtilase domain profile. 118 643 - -
Tsu08g03838 784 CDD Peptidases_S8_3 111 609 IPR034197 -
Tsu08g03838 784 Pfam Subtilase family 149 620 IPR000209 GO:0006508|GO:0008236
Tsu08g03838 784 Pfam Peptidase inhibitor I9 31 108 IPR010259 -
Tsu08g03838 784 PRINTS Subtilisin serine protease family (S8) signature 573 589 IPR015500 -
Tsu08g03838 784 PRINTS Subtilisin serine protease family (S8) signature 227 240 IPR015500 -
Tsu08g03838 784 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Tsu08g03838 784 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 25 781 - -
Tsu08g03838 784 ProSitePatterns Serine proteases, subtilase family, serine active site. 574 584 IPR023828 -
Tsu08g03838 784 Gene3D Peptidase S8/S53 domain 151 654 IPR036852 GO:0004252|GO:0006508
Tsu08g03838 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 781 IPR045051 -
Tsu08g03838 784 Gene3D - 655 783 - -
Tsu08g03838 784 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03838 Tsu-Chr8 56710746 56717512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03838 24 783 Subtilisin-like Serine Gene Family AT5G45650 54.417 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03838 - - gmx:100793064 1194.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03838 08 56710746 56717512 Tsu08g03838 08 56710746 56717512 ECH