Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03820 ATGGAAAAGTTTAGTTCAAGTTATAAGAAGTATCttctttttgttcttgttttgttatcaaatatttcatttcaACTTGCAACATGTGGCTCTATAGTAAAGTTTCTTCCTGGATTTCAAGGACTTCTACCTTTTAATCTTGAAACTGGGTATGTGGGAGTGGGAGAAAATGAGGAAGTACAAGTGTTTTACTATTTCATTGAATCAGAGAACAATCCAAAAGATGATCCTCTTATGCTTTGGTTAACTGGTGGACCTGGTTGTTCTGCTTTGTCTGGCCTTATATTGCATGTAGGTCCACTTGAATTTATAAAAGAGGAGTACAATGGTAGCCTACCTAATCTCATCTTAAAACCACATTCATGGACAAAGGTGAGTAACATTGTATTTGTAGATTTGCCTGTTTTCACAGGCTTCACTTATGCCACAACAGAATCTGGTTCTCAACGAAGCGACACGATACAAGTTCAACAAGTTCATCAATTTCTCAGAAAGTGGTTGGTTGATCATCCAAAATTTCAATCGAATGAAGTTTACATTGGCGGTGATTCATACTCTGGCATTACTATTCCGGCAATTGTTCAAGAAATTGCACAAGGAAATGAAAAAGGAATCCAGCCATGGATAAATCTCCAGGGATACTTGTTGGGGAATCCTGTAACAACTGAAAAGGAAACAAACTATAAAATCCCTTTTGCTCATGGAATGGGACTCATATCCGATGAACTATATGGATCACtgcaaaaaaattgtaaagGAGATTATATGAATGTAGATACCAGAAATGTCTTATGTTCCAGAGATATCAGTTCATTCAGCGAGGCTACATCAGGACTTAATTCAGCACATATTTTAGATCCAGTATGTGAGTGGCTTGATGATACTGAAATTTCTCCAAGGAGATCTCTACTTAAGAAATATCCCTCCAAGTTCATCAATACAAATCTCAAATTGCCACCCTTAAGTTGTCGAAGTTATCCATATTTTCTTTGCGGTTTTTGGGCCAACGATGATAATGTTCGCAAAGCACTGCACATACATAAGGGAAGTATCGGGAAATGGCATCGTTGTACCTATAATATACCTAATAAGGCGGATATCCATAACACGTATGATTATCATGTAAATCTCAGTAGAAAAGGGGTTCGTTCACTAGTTTACAGCGGAGATCACGACCTGTCGGTTCCATTCTTGTCAACACAAGCTTGGATAAGATCTTTGAACTATTCCATTGTTGATGATTGGAGACAGTGGCATACAAATGACCAAGTTGCAGGATACACAAGGACATATTCTAATCAGATGACATTTGCAACTGTGAAGGGTGGAGGACACACGGCTCCGGAGTTTCAGCCTAAACAATGTTTTGACATGTTTAGTAGATGGATATCTAAGAGGCCTTTAAATTATAGAAACATGGCAATGTTTGCTGTGAGCATGGAGAAGCTAAGGAAGCAAACTTTCACGTTAACACGGTTTCCTGCTCGTAGGAGGTCAGTCTCCAAGTGTTGCAACTGTAACCCCGGCAATGTCTCTGTCAACTGTGGCTGCTTCAGAAACAACAAAATGAAATCACAGGAATATGAATGGGAAGTAAAGTTTCTTCCTGGATTTCAAGGACCCCTTCCTTTTATTCTTGAAACTGGGTATGTGGGAGTGGGAGAAAATGAGGATGTGCAAGTGTTTTACTATTTCATTGAATCAGAAAACAATCCAAAAGATGATCCTCTTATGCTTTGGTTAACTGGTGGACCTGGTTGTTCTGCTTTGTCTGGCCTTTTCTTTGAAATTGgtccacttgaatttaaaaaggATGAATACAATGGGAGCTTGCCTAATCTGATCTTGAGGCAACATTCATGGACAAAAGTGAGTAGCATTATATTTGTAGATTTGCCTGTTTCCACAGGCTTCACTTATGCCAGAACAAAGTCTGCTTCTCAACGAAGCGACTCGATACAAGTTAACCAAGCTCTTGAATTTCTCAGGAAGTGGTTGGTTGATCATCCAAAATTTCAATCAAATGAAGTTTACATTGGCGGTGATTCATACTCTGGCGTTACTGTTCCGGTAATTGTTCAAGAAATTGCACAAGCAAATGAAAAAGGGCTCCAACCATGGATTAATCTCCAGGGATACTTGCTGGGGAATGCTATAACAACCGAAAAGGAAATGAACTATATAGTTCCTTTTGCTCATGGAATGGGACTCATATCCGATGAACTATACGACTCACTGCGAAAACACTGTAATGGTGACTATGTAAATGTGGATACCAAAAATGTTTTATGTTCCAAAGACATGGACTCATTCAATGGGGCTACATCAGGAATTAACAAAAACCATATTTTAGAACCGCTATGTGAGTGGCTTTATACTGAAATTTCTCCAAAGAGATCTCTAATTCAGAAATATCAATCCAGAGTGCCGCCCTTGAGCTGTCGAAATTATCCGTATACACTTTGTGCTTATTGGGCCAATGATGCTAATGTTCGCAAAGCACTGCACATACGCAAGGGAAGTATTGGGAAATGGGAACGATGTTCCTATGATATACCATATACGTCCGATATCAGTTACAGCTATGATTATCATGTAAATCTCAGTACGAAAGGATATCGTTCGCTAATTTACAGTGGCGATCATGACATACAAATTACATTCTTGGGGACACAAGCATGGATAAGATCTTTAAACTATTCCATTGTTGATGATTGGAGACAATGGCATACAAATGAGCAAGTTGCAGGGTACACAAGAACTTACTCCAATCGGATGACATTTGCAACTGTGAAGGGTGCAGGACACACAGCTCCAGAGCACCTGCCTGAAGAATGTTTTGCCATGTTTAGTAGGTGGATATCTAAGAGGCCATTGTAG 2880 0.384 MEKFSSSYKKYLLFVLVLLSNISFQLATCGSIVKFLPGFQGLLPFNLETGYVGVGENEEVQVFYYFIESENNPKDDPLMLWLTGGPGCSALSGLILHVGPLEFIKEEYNGSLPNLILKPHSWTKVSNIVFVDLPVFTGFTYATTESGSQRSDTIQVQQVHQFLRKWLVDHPKFQSNEVYIGGDSYSGITIPAIVQEIAQGNEKGIQPWINLQGYLLGNPVTTEKETNYKIPFAHGMGLISDELYGSLQKNCKGDYMNVDTRNVLCSRDISSFSEATSGLNSAHILDPVCEWLDDTEISPRRSLLKKYPSKFINTNLKLPPLSCRSYPYFLCGFWANDDNVRKALHIHKGSIGKWHRCTYNIPNKADIHNTYDYHVNLSRKGVRSLVYSGDHDLSVPFLSTQAWIRSLNYSIVDDWRQWHTNDQVAGYTRTYSNQMTFATVKGGGHTAPEFQPKQCFDMFSRWISKRPLNYRNMAMFAVSMEKLRKQTFTLTRFPARRRSVSKCCNCNPGNVSVNCGCFRNNKMKSQEYEWEVKFLPGFQGPLPFILETGYVGVGENEDVQVFYYFIESENNPKDDPLMLWLTGGPGCSALSGLFFEIGPLEFKKDEYNGSLPNLILRQHSWTKVSSIIFVDLPVSTGFTYARTKSASQRSDSIQVNQALEFLRKWLVDHPKFQSNEVYIGGDSYSGVTVPVIVQEIAQANEKGLQPWINLQGYLLGNAITTEKEMNYIVPFAHGMGLISDELYDSLRKHCNGDYVNVDTKNVLCSKDMDSFNGATSGINKNHILEPLCEWLYTEISPKRSLIQKYQSRVPPLSCRNYPYTLCAYWANDANVRKALHIRKGSIGKWERCSYDIPYTSDISYSYDYHVNLSTKGYRSLIYSGDHDIQITFLGTQAWIRSLNYSIVDDWRQWHTNEQVAGYTRTYSNRMTFATVKGAGHTAPEHLPEECFAMFSRWISKRPL 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03820 959 Gene3D alpha/beta hydrolase 524 795 IPR029058 -
Tsu08g03820 959 Gene3D alpha/beta hydrolase 29 297 IPR029058 -
Tsu08g03820 959 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Tsu08g03820 959 PRINTS Carboxypeptidase C serine protease (S10) family signature 665 690 IPR001563 GO:0004185|GO:0006508
Tsu08g03820 959 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Tsu08g03820 959 PRINTS Carboxypeptidase C serine protease (S10) family signature 926 939 IPR001563 GO:0004185|GO:0006508
Tsu08g03820 959 Pfam Serine carboxypeptidase 37 464 IPR001563 GO:0004185|GO:0006508
Tsu08g03820 959 Pfam Serine carboxypeptidase 536 955 IPR001563 GO:0004185|GO:0006508
Tsu08g03820 959 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 11 467 - -
Tsu08g03820 959 SUPERFAMILY alpha/beta-Hydrolases 532 958 IPR029058 -
Tsu08g03820 959 SUPERFAMILY alpha/beta-Hydrolases 33 468 IPR029058 -
Tsu08g03820 959 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 532 958 - -
Tsu08g03820 959 Gene3D - 813 959 - -
Tsu08g03820 959 Gene3D - 330 468 - -
Tsu08g03820 959 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 467 IPR001563 GO:0004185|GO:0006508
Tsu08g03820 959 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 532 958 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03820 Tsu-Chr8 56536226 56551994 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03820 821 959 Calmodulin-binding Proteins AT2G22960 64.029 2.11e-56 191