Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03814 ATGCCTAAGCAAATCAACGAGATTAAGGATTTCCTTCTCACTGCCAGAAGGAAGGACGCGAGGTCAGTGAGAATCAAGAGGAGCAAGGATGTCGTTAAGTTCAAGGTCAGATGTTCCAAGTACCTTTACACACTCTGTGTGTTTGACGTTGAGAAAGCCGACAAATTGAAGCAATCACTTCCTCCAGGTCTGTAA 195 0.4462 MPKQINEIKDFLLTARRKDARSVRIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSLPPGL 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03814 64 Pfam Ribosomal L38e protein family 2 64 IPR002675 GO:0003735|GO:0005840|GO:0006412
Tsu08g03814 64 PANTHER 60S RIBOSOMAL PROTEIN L38 1 64 IPR002675 GO:0003735|GO:0005840|GO:0006412
Tsu08g03814 64 Gene3D - 1 64 IPR038464 -
Tsu08g03814 64 PANTHER - 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03814 Tsu-Chr8 56485423 56486960 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03814 1 64 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 92.188 2.92e-39 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03814 K02923 - psom:113348734 127.102