Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03796 ATGGTATTGTCTCCAAGTTTGGAGAATCATATAGTCCCAACCTATGAATTGTTGCATAGATCATTGCAATCAGACAAGGAAACTATTGATCGTGTAATTCATAATCCATATTTACTTAGTGACTGTCGTGTGCCACATAACATTACATTGTTGGTTGAGAATGGAGTGAAGGACTTAACCATTGGAAGATTGCTTCGGACGCATTCACGGTCATTGAGTACGAATAACACTTATATGTTAAAGTTGGTGAAGGAATTGAAGGATTTGGGTTTTGATCCTTCAAAAATAACCTTTGGTACAGCATTGGAAGCGAAAGGATCGGTAAACAAAACATTGTGGAAAGAGAAAGTTGATGCCTTTAAGAAATGGGggtggtctgatgaagatgttATAGAAGCATTTAGAAGGCAGCCTCAATGCATGTTAACATCagttgataaaattaatatagtgATGAGTTTTTGGGTCGATCAGTTGGGTTGGGATGTGCGTGCTCTTGTAAAAAGACCGGCGGTTATTTcaaataatttggaaaaaaggATCATTCCAAGGGCCTCGATTAGTTATTGGAATATTAGTATGGAGAAGTTTATTGAAGTGGGAAAGAACACTCGGATGATCCACATCCGGATAATCCGAATGGATGGGACTGTTTGTCAGCCGGAGACTCAGATTCGGATTAAGCCATTGACTGCTTTGGCTTCTATGGTGGAGAAAGTTGAGCAGTGA 729 0.3676 MVLSPSLENHIVPTYELLHRSLQSDKETIDRVIHNPYLLSDCRVPHNITLLVENGVKDLTIGRLLRTHSRSLSTNNTYMLKLVKELKDLGFDPSKITFGTALEAKGSVNKTLWKEKVDAFKKWGWSDEDVIEAFRRQPQCMLTSVDKINIVMSFWVDQLGWDVRALVKRPAVISNNLEKRIIPRASISYWNISMEKFIEVGKNTRMIHIRIIRMDGTVCQPETQIRIKPLTALASMVEKVEQ 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03796 242 PANTHER CGI-12 PROTEIN-RELATED 2 189 IPR003690 GO:0003690|GO:0006355
Tsu08g03796 242 Gene3D Transcription termination factor 3, mitochondrial 1 206 IPR038538 -
Tsu08g03796 242 Pfam mTERF 111 198 IPR003690 GO:0003690|GO:0006355
Tsu08g03796 242 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 2 189 - -
Tsu08g03796 242 SMART mt_12 163 203 IPR003690 GO:0003690|GO:0006355
Tsu08g03796 242 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Tsu08g03796 242 SMART mt_12 62 92 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03796 Tsu-Chr8 56249451 56251714 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu08g03796 mTERF 2.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03796 K15032 - gmx:102667698 191.045