Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03787 ATGGAGAATGAGATTGAACAATGTAAGTTTCCAAGACTTGAAAATGTCTTAAACAATTCAATGAACAACAAGAACATAGGTTCTggtagaaagaaaaatgttgcaGGAAGTGATTTTGAAAGTAGTTGGCAGCAACATCAACAACAGAATGCATCAAGAATTGTTAGAGTTTCTAGAGCTTCTGGTGGAAAAGATAGACATAGTAAAGTAATGACTTCAAAAGGTTTAAGAGATAGAAGAGTTAGGTTATCGGTTACAACAGCGATTCAATTCTATGATATTCAAGATAGACTTGGTTATGATCAACCAAGTAAAGCTGTTGATTGGTTAATCAAAGCCGCTTCTGATTCTATCTCGGAATTACCTTCTCTCGATAGCACTTTTACTCAAACCGATCCAAAACAACCAAGTTATCAGAATCAAAGCgagaatcagaatcagaatcagaaaCAAAACCATAACAACTTTTGTTTGTCTAAGTCTGGTTGTAGTAGTACTTCTGAGACAAGTAAAGAGAATGATTGTAGCACCATTGTACAagaacaaaaacatcatcagaATATGTCTCAAACTGCTTCTTTCACCGAGTTACTCACCGGTGGAATTGGTAGTAGTACTGTCACAAGTAATAATGGATCGGTTCATGATCAGATTCATCATCATGGTGGTTTTTCAGAACAAATCCAACTAGGACATTCTTCACATTCTCATTCACTTCAAGTTTCACCATTCAATggtgaaaatgaaaacaactCAGATATTACTCAACTGCAGCATTTTCCATTCATGTCTTCGTCTTCTGATCAACAAAATGGGAATCATGACAATTACAATCTCAACTTTACGATATCTTCTTCGGGCCTTGTTGGTTACAATAGGGGGACCCTTCAGTCCAATTCACTTTTACCTCATTTTCAGAGGTTTTCACCTGTTATGGATCATggatcatcaacatcatcatcatccaataATCTACCTTTCTTCATGGGAGGTTCTGCTGCTCCTGTTGCTACTCCAACCATGGATCAACAACATCTTCAATTCTCACCTCTCTTTGATGCTCGTTTGCAACTTTTCTATGGTGATGGAAGTCGGCATTCGGATCAAAAGGAAAAATGCAATAAGAACTGA 1131 0.3369 MENEIEQCKFPRLENVLNNSMNNKNIGSGRKKNVAGSDFESSWQQHQQQNASRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDIQDRLGYDQPSKAVDWLIKAASDSISELPSLDSTFTQTDPKQPSYQNQSENQNQNQKQNHNNFCLSKSGCSSTSETSKENDCSTIVQEQKHHQNMSQTASFTELLTGGIGSSTVTSNNGSVHDQIHHHGGFSEQIQLGHSSHSHSLQVSPFNGENENNSDITQLQHFPFMSSSSDQQNGNHDNYNLNFTISSSGLVGYNRGTLQSNSLLPHFQRFSPVMDHGSSTSSSSNNLPFFMGGSAAPVATPTMDQQHLQFSPLFDARLQLFYGDGSRHSDQKEKCNKN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03787 376 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 215 373 IPR005333 GO:0003700
Tsu08g03787 376 ProSiteProfiles TCP domain profile. 63 121 IPR017887 -
Tsu08g03787 376 PANTHER TRANSCRIPTION FACTOR TCP24 4 210 - -
Tsu08g03787 376 MobiDBLite consensus disorder prediction 21 40 - -
Tsu08g03787 376 MobiDBLite consensus disorder prediction 122 191 - -
Tsu08g03787 376 PANTHER TRANSCRIPTION FACTOR TCP24 215 373 - -
Tsu08g03787 376 Pfam TCP family transcription factor 62 182 IPR017887 -
Tsu08g03787 376 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 210 IPR005333 GO:0003700
Tsu08g03787 376 MobiDBLite consensus disorder prediction 230 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03787 Tsu-Chr8 56145985 56150524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03787 50 376 TCP Transcription Factor Family AT4G18390 39.353 2.47e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu08g03787 TCP 7.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03787 - - cam:101507434 382.104