Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03766 ATGCACATCATCGACAAAGACACTCAATTGGACTCCAACACCATTCATAGAGTTGCTACACTCTTCGAAGACCACTCAGATCTTCTTGACGGGTTTATTACTTTTCTTCCGGATGCTACCACAGCTGCCTCTGCTCATGCTGCTGCTCAAAATTCTGTGTTTTGTGATAGGCGCTCTGCAATGCCAACAGTGCGGCAAGCACATGTTGAAAAGGTTTGCCTCCAATTCTTATGTCCCTTTATGTAG 246 0.4512 MHIIDKDTQLDSNTIHRVATLFEDHSDLLDGFITFLPDATTAASAHAAAQNSVFCDRRSAMPTVRQAHVEKVCLQFLCPFM 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03766 81 SUPERFAMILY PAH2 domain 13 39 IPR036600 GO:0006355
Tsu08g03766 81 Gene3D Paired amphipathic helix 1 40 IPR036600 GO:0006355
Tsu08g03766 81 Pfam Paired amphipathic helix repeat 15 36 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03766 Tsu-Chr8 55961153 55962214 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu08g03766 PAH 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03766 - K11644 ccaj:109792823 70.8626