Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03724 ATGCTCAGCCTCTTACATCACCCAAATCTTGTGAATTTGATTGGTTATTGTGCTGATGGTGATCAGCGGCTGCTCGTTTATGAATTTATGCCATTGGGATCTTTGGAGGATCATTTACACGATCTACCTCCCGACAAGGAGCCTCTAGACTGGAACACAAGGATGAAGATAGCAGCTGGTGCAGCCAAGGGATTGGAATATTTGCATGATAAGGCAAATCCCCCTGTGATATATAGAGACTTAAAATCATCCAACATCCTCTTAGACGAAGGTTTTCATCCTAAGTTATCAGATTTTGGGTTGGCAAAACTTGGTCCAGTTGGTGACAAGACTCATGTATCCACACGAGTAATGGGAACATATGGCTATTGTGCTCCAGAATATGCTATGACTGGTCAACTAACTCTGAAATCTGACGTCTATAGTTTTGGAGTTGTCTTCCTTGAACTCATTACCGGACGCAAGGCTATTGATAATACGCGTGGGCATGGAGAGCATAATCTCGTGGCATGGGCACGACCTCTTTTTAAAGATCGCAGGAAGTTTCCGAAAATGGCTGATCCACTACTTCAAGGAAGATATCCAATGCGGGGACTTTACCAAGCACTTGCAGTTGCAGCGATGTGTTTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGAGATGTTGTTACTGCTCTCACATATCTGGCTGCCCAAACATTCGATCCGAATGCAGGCAATCAGTCGAACAGGGGTGGTTCATCAACTCCTAGGATGAGGGATGACAGAAGGAGCAGCATGGCAGATAGTGTGGATAGTCCCGACCGTGCACGGCTTGGTTCCCCTTCTACCCATAGAAACTCGCCTGACTTCAGGAAGAGAGAAGGTCGGGATCCAAGTGAGTTGGGAAGGATCGATACTGGTGGCGGTGGATCAGGGAGAAAATGGGGATTGGATGATTTAGAAAGGCGCGATTCTCAGAGAGATAGCCCTGTAAATACCGGAAGAGGTAGAGAAACTCCAAGGAACCGCGACCTGGATAGAGAACGTGCAGTTGCAGAAGCAAGAGTATGGGGTGAGAATtggagagagaagaaaagagcAAATGCAATGGGCAGCTTTGATGGTACAAATgaatga 1122 0.4545 MLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLAAQTFDPNAGNQSNRGGSSTPRMRDDRRSSMADSVDSPDRARLGSPSTHRNSPDFRKREGRDPSELGRIDTGGGGSGRKWGLDDLERRDSQRDSPVNTGRGRETPRNRDLDRERAVAEARVWGENWREKKRANAMGSFDGTNE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03724 373 MobiDBLite consensus disorder prediction 236 344 - -
Tsu08g03724 373 Pfam Protein kinase domain 2 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03724 373 SMART serkin_6 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03724 373 Gene3D Transferase(Phosphotransferase) domain 1 31 245 - -
Tsu08g03724 373 MobiDBLite consensus disorder prediction 281 296 - -
Tsu08g03724 373 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Tsu08g03724 373 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 367 - -
Tsu08g03724 373 PANTHER OS07G0668900 PROTEIN 1 367 - -
Tsu08g03724 373 MobiDBLite consensus disorder prediction 310 326 - -
Tsu08g03724 373 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu08g03724 373 MobiDBLite consensus disorder prediction 250 265 - -
Tsu08g03724 373 SUPERFAMILY Protein kinase-like (PK-like) 2 227 IPR011009 -
Tsu08g03724 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03724 Tsu-Chr8 55400056 55405739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03724 1 272 Glycoside Hydrolase AT3G07070 65.942 1.75e-125 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tsu08g03724 Pkinase 1.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03724 - - gmx:100814575 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g03724 08 55400056 55405739 Tsu08g03724 08 55400056 55405739 ECH